RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 RPRMLQ8N4K4 120 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 ZNF441Q8N8Z8 693 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 FNDC5Q8NAU1 212 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 GOLM1Q8NBJ4 401 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 CDC26Q8NHZ8 85 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 FAM57AQ8TBR7 257 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 RIT1Q92963 219 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 THOC1Q96FV9 657 aaKnown RBP11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 APIPQ96GX9 242 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 SGCZQ96LD1 299 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 CNPPD1Q9BV87 410 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 WWTR1Q9GZV5 400 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 NSRP1Q9H0G5 558 aaKnown RBP11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 CXorf21Q9HAI6 301 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 NPHS2Q9NP85 383 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 FGFR1OP2Q9NVK5 253 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 CES1P1Q9UKY3 287 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 LIPGQ9Y5X9 500 aa11.7□□□□□ -0.54
SEC61A1-206ENST00000491668 NCKAP5O14513 1909 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 GOLGA8QA0A0J9YX86 632 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 GOLGA8OA6NCC3 632 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 E9PLN8 166 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 GOLGA8NF8WBI6 632 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 LSM1O15116 133 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 HNRNPRO43390 633 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 CDC40O60508 579 aaKnown RBP eCLIP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 TGDSO95455 350 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 JUNP05412 331 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 ANXA4P09525 319 aaPredicted RBP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 ESRRAP11474 423 aaPredicted RBP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 AGAP20933 346 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 S1PR1P21453 382 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 SSTR4P31391 388 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 GALNSP34059 522 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 PIGAP37287 484 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 AQP5P55064 265 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 MGAT2Q10469 447 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 MAD2L1Q13257 205 aaPredicted RBP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 EBPQ15125 230 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 HYAL4Q2M3T9 481 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 XKR7Q5GH72 579 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 NDUFAF5Q5TEU4 345 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 OR52E8Q6IFG1 317 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 OPN5Q6U736 354 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 TMEM64Q6YI46 380 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 Q6ZSR9 355 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 ACAD11Q709F0 780 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 CD163Q86VB7 1156 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 LRRC34Q8IZ02 419 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 TMEM251Q8N6I4 163 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 ZNF615Q8N8J6 731 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 OR2T11Q8NH01 316 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 PHF10Q8WUB8 498 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 CHTF18Q8WVB6 975 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 SPACA9Q96E40 222 aaPredicted RBP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 CHMP6Q96FZ7 201 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 METTL2AQ96IZ6 378 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 C3orf30Q96M34 536 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 VKORC1Q9BQB6 163 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 FAM173AQ9BQD7 235 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 WDR41Q9HAD4 459 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 MEAF6Q9HAF1 191 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 TUBA8Q9NY65 449 aaPredicted RBP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 FAM53CQ9NYF3 392 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 DCTN4Q9UJW0 460 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 ADAM29Q9UKF5 820 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 EIF3LQ9Y262 564 aaKnown RBP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 TMED5Q9Y3A6 229 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 POLR3HQ9Y535 204 aaPredicted RBP11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 CELSR1Q9NYQ6 3014 aa11.69□□□□□ -0.54
SEC61A1-206ENST00000491668 LRRC3CA6NJW4 275 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 PRRG2O14669 202 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 OR10H2O60403 315 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 IGHG3P01860 377 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 TPOP07202 933 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 FBXO45P0C2W1 286 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 RFPL3SP0C7P2 107 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 LBPP18428 481 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 PRPH2P23942 346 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 EPHA3P29320 983 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 TIA1P31483 386 aaKnown RBP eCLIP11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 LSP1P33241 339 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 MAGEA5P43359 124 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 KIR3DL1P43629 444 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 DUSP2Q05923 314 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 FUT7Q11130 342 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 DUSP8Q13202 625 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 NOXRED1Q6NXP6 359 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 ARHGAP11AQ6P4F7 1023 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 RNF111Q6ZNA4 994 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 CPLX4Q7Z7G2 160 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 SIMC1Q8NDZ2 872 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 C7orf57Q8NEG2 295 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 OR10G3Q8NGC4 313 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 PAQR8Q8TEZ7 354 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 TM4SF18Q96CE8 201 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 RILPQ96NA2 401 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 GAL3ST4Q96RP7 486 aa11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 PELOQ9BRX2 385 aaKnown RBP11.68□□□□□ -0.54
SEC61A1-206ENST00000491668 C1orf50Q9BV19 199 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms