RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 B3GALT5-AS1P59052 145 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 IL2P60568 153 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 ACTG1P63261 375 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 BSPH1Q075Z2 132 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 BIKQ13323 160 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 CR1LQ2VPA4 569 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 PRR31Q5SQ13 230 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 PLCZ1Q86YW0 608 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 ZNF619Q8N2I2 560 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 LRRC57Q8N9N7 239 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 TANKQ92844 425 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 S100PBPQ96BU1 408 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 TBCDQ9BTW9 1192 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 SORBS1Q9BX66 1292 aaKnown RBP12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 ROGDIQ9GZN7 287 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 NXF5Q9H1B4 397 aaKnown RBP12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 C20orf96Q9NUD7 363 aaPredicted RBP12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 CISD1Q9NZ45 108 aaKnown RBP12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 EHD3Q9NZN3 535 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 DKKL1Q9UK85 242 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 CLEC4AQ9UMR7 237 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 ZNF281Q9Y2X9 895 aa12.24□□□□□ -0.45
EXOSC3-207ENST00000490516 SYCE3A1L190 88 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 PRAMEF25A6NGN4 478 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 SAP18O00422 153 aaKnown RBP12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 SEC14L5O43304 696 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 PRAMEF4O60810 478 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 RAMP1O60894 148 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 TNFRSF21O75509 655 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 AQP8O94778 261 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 AIFM1O95831 613 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 ENO2P09104 434 aaPredicted RBP12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 TPM1P09493 284 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 CT62P0C5K7 136 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 PEPDP12955 493 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 CREB1P16220 341 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 C21orf58P58505 322 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 SLAMF1Q13291 335 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 SNTA1Q13424 505 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 DOC2AQ14183 400 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 TSC22D1Q15714 1073 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 PPP1R3AQ16821 1122 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 PRAMEF9Q5VWM5 478 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 OR5M10Q6IEU7 315 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 NUP54Q7Z3B4 507 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 UBL4BQ8N7F7 174 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 ZNF615Q8N8J6 731 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 BANPQ8N9N5 519 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 PROX1Q92786 737 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 VPS39Q96JC1 886 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 PELOQ9BRX2 385 aaKnown RBP12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 WHRNQ9P202 907 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 GPR52Q9Y2T5 361 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 ZNF175Q9Y473 711 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 NBEAL2Q6ZNJ1 2754 aa12.23□□□□□ -0.45
EXOSC3-207ENST00000490516 A0A1W2PS29 197 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 GLOD5A6NK44 160 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 B4DXG7 233 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 UGT2B11O75310 529 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 SCELO95171 688 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 GPR75O95800 540 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 TGFAP01135 160 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 FESP07332 822 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 CCDC166P0CW27 439 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 SSR2P43308 183 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 GGTLC2Q14390 218 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 AP5B1Q2VPB7 878 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 MIDNQ504T8 468 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 HSP90AA5PQ58FG0 334 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 OR6K3Q8NGY3 331 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 EGFL8Q99944 293 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 PRR14Q9BWN1 585 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 OR10A5Q9H207 317 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 OR10A4Q9H209 315 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 IARS2Q9NSE4 1012 aaKnown RBP12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 DNAJC11Q9NVH1 559 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 EMC9Q9Y3B6 208 aa12.22□□□□□ -0.45
EXOSC3-207ENST00000490516 DPRXA6NFQ7 191 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 EFCAB8A8MWE9 144 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 ALDOAP04075 364 aaKnown RBP12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 TPSB2P20231 275 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 CD22P20273 847 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 PSMB1P20618 241 aaKnown RBP12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 GPX3P22352 226 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 GABRB3P28472 473 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 SLC6A8P48029 635 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 HNRNPH2P55795 449 aaKnown RBP12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 HMGCS1Q01581 520 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 TNFRSF17Q02223 184 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 PDAP1Q13442 181 aaKnown RBP12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 RAB35Q15286 201 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 TPSAB1Q15661 275 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 TAB1Q15750 504 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 PDCD2Q16342 344 aaPredicted RBP12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 C11orf71Q6IPW1 123 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 BEND4Q6ZU67 534 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 PEX26Q7Z412 305 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 GPR180Q86V85 440 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 LMNTD2Q8IXW0 634 aa12.21□□□□□ -0.45
EXOSC3-207ENST00000490516 SRFBP1Q8NEF9 429 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms