RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 PCDH7O60245 1069 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 TSPAN2O60636 221 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 PPM1BO75688 479 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 P04436 131 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 CHRNB4P30926 498 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 CDK9P50750 372 aaKnown RBP10.8□□□□□ -0.68
SRSF4-204ENST00000489898 CORO7P57737 925 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 TRA2BP62995 288 aaKnown RBP10.8□□□□□ -0.68
SRSF4-204ENST00000489898 PLGLB1Q02325 96 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 SLC18A2Q05940 514 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 ACSF3Q4G176 576 aaPredicted RBP10.8□□□□□ -0.68
SRSF4-204ENST00000489898 NHSL2Q5HYW2 709 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 CES4AQ5XG92 561 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 ADGRE4PQ86SQ3 457 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 DMRTC2Q8IXT2 367 aaPredicted RBP10.8□□□□□ -0.68
SRSF4-204ENST00000489898 IFT20Q8IY31 132 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 CEP112Q8N8E3 955 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 WDSUB1Q8N9V3 476 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 FAM13CQ8NE31 585 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 C7orf57Q8NEG2 295 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 OR7G2Q8NG99 324 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 OR52R1Q8NGF1 315 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 OR5M3Q8NGP4 307 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 OR9A2Q8NGT5 310 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 OR2T11Q8NH01 316 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 HOXB13Q92826 284 aaPredicted RBP10.8□□□□□ -0.68
SRSF4-204ENST00000489898 KLHL29Q96CT2 875 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 ZNF597Q96LX8 424 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 SECISBP2Q96T21 854 aaKnown RBP10.8□□□□□ -0.68
SRSF4-204ENST00000489898 SH3GL2Q99962 352 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 EBPLQ9BY08 206 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 RTN4RQ9BZR6 473 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 TUBB1Q9H4B7 451 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 GALNT9Q9HCQ5 603 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 RYDENQ9NUL5 291 aaKnown RBP10.8□□□□□ -0.68
SRSF4-204ENST00000489898 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.8□□□□□ -0.68
SRSF4-204ENST00000489898 MKS1Q9NXB0 559 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 VPS29Q9UBQ0 182 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 TBK1Q9UHD2 729 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 SNX6Q9UNH7 406 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 GPR55Q9Y2T6 319 aaPredicted RBP10.8□□□□□ -0.68
SRSF4-204ENST00000489898 HEATR5AQ86XA9 2040 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 MPDZO75970 2070 aa10.8□□□□□ -0.68
SRSF4-204ENST00000489898 DNHD1Q96M86 4753 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 TRGV5A0A0B4J1U4 118 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 IQANK1A0A1B0GTG1 560 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 SNPHO15079 494 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 ERAL1O75616 437 aaKnown RBP10.79□□□□□ -0.68
SRSF4-204ENST00000489898 ENO1P06733 434 aaKnown RBP10.79□□□□□ -0.68
SRSF4-204ENST00000489898 COX6B1P14854 86 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 NT5EP21589 574 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 PRPH2P23942 346 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 TACR1P25103 407 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 CEACAM8P31997 349 aaPredicted RBP10.79□□□□□ -0.68
SRSF4-204ENST00000489898 NAGLUP54802 743 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 PKNOX1P55347 436 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 KCNJ2P63252 427 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 PMPCAQ10713 525 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 EXOSC6Q5RKV6 272 aaKnown RBP10.79□□□□□ -0.68
SRSF4-204ENST00000489898 C1orf185Q5T7R7 199 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 FAM71E1Q6IPT2 247 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 SCIMPQ6UWF3 145 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 PAGE2Q7Z2X7 111 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 TRIM46Q7Z4K8 759 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 C16orf78Q8WTQ4 265 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 ATP6V1E2Q96A05 226 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 OMA1Q96E52 524 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 SLC35A4Q96G79 324 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 DOHHQ9BU89 302 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 WDR41Q9HAD4 459 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 EHD3Q9NZN3 535 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 BOKQ9UMX3 212 aaPredicted RBP10.79□□□□□ -0.68
SRSF4-204ENST00000489898 DLGAP4Q9Y2H0 992 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 L3MBTL1Q9Y468 752 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 PCDHGB3Q9Y5G1 929 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 ABCA4P78363 2273 aa10.79□□□□□ -0.68
SRSF4-204ENST00000489898 NIPBLQ6KC79 2804 aaeCLIP10.79□□□□□ -0.68
SRSF4-204ENST00000489898 FRG2CA6NGY1 282 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 MYO1GB0I1T2 1018 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 WDR1O75083 606 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 GLRA3O75311 464 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 CSNK2A2P19784 350 aaPredicted RBP10.78□□□□□ -0.68
SRSF4-204ENST00000489898 SERPINB3P29508 390 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 ARL1P40616 181 aaPredicted RBP10.78□□□□□ -0.68
SRSF4-204ENST00000489898 MAP3K8P41279 467 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 SLCO1A2P46721 670 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 TRPC1P48995 793 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 MAN2A2P49641 1150 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 ZNF136P52737 540 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 DNAJB13P59910 316 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 PSG6Q00889 435 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 EIPR1Q53HC9 387 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 ZNF385BQ569K4 471 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 TTC19Q6DKK2 380 aaPredicted RBP10.78□□□□□ -0.68
SRSF4-204ENST00000489898 VASNQ6EMK4 673 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 B3GNT6Q6ZMB0 384 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 MEX3BQ6ZN04 569 aaKnown RBP10.78□□□□□ -0.68
SRSF4-204ENST00000489898 RNF165Q6ZSG1 346 aa10.78□□□□□ -0.68
SRSF4-204ENST00000489898 GBP7Q8N8V2 638 aaPredicted RBP10.78□□□□□ -0.68
SRSF4-204ENST00000489898 OR4N2Q8NGD1 307 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms