RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 OR4F4Q96R69 305 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 NLNQ9BYT8 704 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 TSPY26PQ9H489 355 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 ERVK-18Q9QC07 812 aa3.62□□□□□ -1.83
CCDC39-206ENST00000489868 CDX4O14627 284 aaPredicted RBP3.61□□□□□ -1.83
CCDC39-206ENST00000489868 TNFSF11O14788 317 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 GOSR1O95249 250 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 SLC2A10O95528 541 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 HMOX1P09601 288 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 PTPN4P29074 926 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 NSFP46459 744 aaKnown RBP3.61□□□□□ -1.83
CCDC39-206ENST00000489868 NPY2RP49146 381 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 CNN1P51911 297 aaKnown RBP3.61□□□□□ -1.83
CCDC39-206ENST00000489868 RAG2P55895 527 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 ERVPABLB-1P60509 514 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 TEFQ10587 303 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 LASP1Q14847 261 aaKnown RBP3.61□□□□□ -1.83
CCDC39-206ENST00000489868 QRICH1Q2TAL8 776 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 ZNF528Q3MIS6 628 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 BNIPLQ7Z465 357 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 FNDC8Q8TC99 324 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 LHX4Q969G2 390 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 SLCO4A1Q96BD0 722 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 PHYHIPLQ96FC7 376 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 DTD2Q96FN9 168 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 CYYR1Q96J86 154 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 MAPKAP1Q9BPZ7 522 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 FAM213AQ9BRX8 229 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 TMEM245Q9H330 911 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 SLC9A8Q9Y2E8 581 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 TEX264Q9Y6I9 313 aa3.61□□□□□ -1.83
CCDC39-206ENST00000489868 TDRD6O60522 2096 aaKnown RBP3.61□□□□□ -1.83
CCDC39-206ENST00000489868 CHEK1O14757 476 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 KINO60870 393 aaKnown RBP3.6□□□□□ -1.83
CCDC39-206ENST00000489868 ATP6V1G1O75348 118 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 ECDO95905 644 aaPredicted RBP3.6□□□□□ -1.83
CCDC39-206ENST00000489868 CT45A10P0DMU9 189 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 AREGP15514 252 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 CCL11P51671 97 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 KIAA0040Q15053 153 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 ISXQ2M1V0 245 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 CNTN4Q8IWV2 1026 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 GPR65Q8IYL9 337 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 PYROXD2Q8N2H3 581 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 C10orf53Q8N6V4 93 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 RFESDQ8TAC1 157 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 FAF2Q96CS3 445 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 VMP1Q96GC9 406 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 C9orf85Q96MD7 179 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 DEFB118Q96PH6 123 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 PDFQ9HBH1 243 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 MIEF1Q9NQG6 463 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 NDUFA13Q9P0J0 144 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 PLEKHA6Q9Y2H5 1048 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 NTNG1Q9Y2I2 539 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 ZNF175Q9Y473 711 aa3.6□□□□□ -1.83
CCDC39-206ENST00000489868 MFSD2BA6NFX1 497 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 FAM220BPB1ANY3 271 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 EI24O14681 340 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 HDAC3O15379 428 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 HOXB7P09629 217 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 HIST1H2AGP0C0S8 130 aaPredicted RBP3.59□□□□□ -1.83
CCDC39-206ENST00000489868 DRD3P35462 400 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 ALDH3B2P48448 385 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 GALK2Q01415 458 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 ASAH1Q13510 395 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 ZIC1Q15915 447 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 SHROOM1Q2M3G4 852 aaPredicted RBP3.59□□□□□ -1.83
CCDC39-206ENST00000489868 HIST2H2AA3Q6FI13 130 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 ZNF677Q86XU0 584 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.59□□□□□ -1.83
CCDC39-206ENST00000489868 HIST1H2ACQ93077 130 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 SNX21Q969T3 373 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 APOOQ9BUR5 198 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 ABCG4Q9H172 646 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 CARD9Q9H257 536 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 ALG9Q9H6U8 611 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 ARGLU1Q9NWB6 273 aaPredicted RBP3.59□□□□□ -1.83
CCDC39-206ENST00000489868 MIOXQ9UGB7 285 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 SLC2A6Q9UGQ3 507 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 ENTPD4Q9Y227 616 aa3.59□□□□□ -1.83
CCDC39-206ENST00000489868 NPIPA5A0A0B4J1W7 369 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 MACROD2A1Z1Q3 448 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 EPOPA6NHQ4 379 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 NPIPA5E9PKD4 350 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 G3V3Y1 287 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 PDLIM1O00151 329 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 SLC17A2O00624 439 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 ARPC1BO15143 372 aaKnown RBP3.58□□□□□ -1.84
CCDC39-206ENST00000489868 NUDT21O43809 227 aaKnown RBP3.58□□□□□ -1.84
CCDC39-206ENST00000489868 VEGFDO43915 354 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 SYNGR4O95473 234 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 CYP11B1P15538 503 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 MARCKSP29966 332 aaPredicted RBP3.58□□□□□ -1.84
CCDC39-206ENST00000489868 RGRP47804 291 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 SGSHP51688 502 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 CCZ1BP86790 482 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 CCZ1P86791 482 aaPredicted RBP3.58□□□□□ -1.84
CCDC39-206ENST00000489868 ZNF699Q32M78 642 aa3.58□□□□□ -1.84
CCDC39-206ENST00000489868 CMPK2Q5EBM0 449 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms