RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 HPS6Q86YV9 775 aa4.33□□□□□ -1.72
VPS26A-206ENST00000489794 LRRC17Q8N6Y2 441 aa4.33□□□□□ -1.72
VPS26A-206ENST00000489794 RELL2Q8NC24 303 aaPredicted RBP4.33□□□□□ -1.72
VPS26A-206ENST00000489794 SLC13A3Q8WWT9 602 aa4.33□□□□□ -1.72
VPS26A-206ENST00000489794 SYTL2Q9HCH5 934 aa4.33□□□□□ -1.72
VPS26A-206ENST00000489794 CENPMQ9NSP4 180 aa4.33□□□□□ -1.72
VPS26A-206ENST00000489794 IMPAD1Q9NX62 359 aa4.33□□□□□ -1.72
VPS26A-206ENST00000489794 MIOXQ9UGB7 285 aa4.33□□□□□ -1.72
VPS26A-206ENST00000489794 RAD54L2Q9Y4B4 1467 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 SSX5O60225 188 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 SRPX2O60687 465 aaPredicted RBP4.32□□□□□ -1.72
VPS26A-206ENST00000489794 ECDO95905 644 aaPredicted RBP4.32□□□□□ -1.72
VPS26A-206ENST00000489794 SAA4P35542 130 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 VCPP55072 806 aaKnown RBP4.32□□□□□ -1.72
VPS26A-206ENST00000489794 SMC1AQ14683 1233 aaKnown RBP4.32□□□□□ -1.72
VPS26A-206ENST00000489794 CD226Q15762 336 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 DNAJC21Q5F1R6 531 aaKnown RBP4.32□□□□□ -1.72
VPS26A-206ENST00000489794 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 GOLGA7Q7Z5G4 137 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 HSCBQ8IWL3 235 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 SPAG16Q8N0X2 631 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 SPEM1Q8N4L4 309 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 TYMSOSQ8TAI1 123 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 CRYGNQ8WXF5 182 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 TMEM186Q96B77 213 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 C9orf85Q96MD7 179 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 NSMCE2Q96MF7 247 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 NDUFAF3Q9BU61 184 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 ZNF446Q9NWS9 450 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 BCAP29Q9UHQ4 241 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 ZNF107Q9UII5 783 aaPredicted RBP4.32□□□□□ -1.72
VPS26A-206ENST00000489794 PURGQ9UJV8 347 aaKnown RBP4.32□□□□□ -1.72
VPS26A-206ENST00000489794 ZNF490Q9ULM2 529 aaPredicted RBP4.32□□□□□ -1.72
VPS26A-206ENST00000489794 TP53TG3Q9ULZ0 132 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 DHRS7Q9Y394 339 aa4.32□□□□□ -1.72
VPS26A-206ENST00000489794 TRAV9-2A0A087WT02 112 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 TRABD2BA6NFA1 517 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 NPIPA2E9PIF3 369 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 TYROBPO43914 113 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 RHBDL1O75783 438 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 VENTXO95231 258 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 OAS1P00973 400 aaKnown RBP4.31□□□□□ -1.72
VPS26A-206ENST00000489794 FNTAP49354 379 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 BTG3Q14201 252 aaPredicted RBP4.31□□□□□ -1.72
VPS26A-206ENST00000489794 GAMTQ14353 236 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 PPP1R3AQ16821 1122 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 ACSF3Q4G176 576 aaPredicted RBP4.31□□□□□ -1.72
VPS26A-206ENST00000489794 FAM219BQ5XKK7 198 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 FAM159AQ6UWV7 190 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 NEK11Q8NG66 645 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 TFB1MQ8WVM0 346 aaKnown RBP4.31□□□□□ -1.72
VPS26A-206ENST00000489794 PHYHIPQ92561 330 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 SPATA13Q96N96 652 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 DEFB118Q96PH6 123 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 MCCC1Q96RQ3 725 aaPredicted RBP4.31□□□□□ -1.72
VPS26A-206ENST00000489794 NLNQ9BYT8 704 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 TSPY26PQ9H489 355 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 STARD5Q9NSY2 213 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 DHRS4-AS1Q9P1J3 65 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 ARMCX1Q9P291 453 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 IKZF3Q9UKT9 509 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 NAALAD2Q9Y3Q0 740 aa4.31□□□□□ -1.72
VPS26A-206ENST00000489794 A0A0J9YVX5 310 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 CFAP73A6NFT4 308 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 PDLIM1O00151 329 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 ZNF253O75346 499 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 STK17BO94768 372 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 PTMAP06454 111 aaKnown RBP4.3□□□□□ -1.72
VPS26A-206ENST00000489794 H2AFZP0C0S5 128 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 TRIM23P36406 574 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 HERVK_113P63132 956 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 ERVK-8P63133 956 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 MYBPC1Q00872 1141 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 TIMM50Q3ZCQ8 353 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 GPBP1Q86WP2 473 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 VN1R17PQ8TDU5 208 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 LHX4Q969G2 390 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 ERVK-6Q9BXR3 956 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 KRTAP4-4Q9BYR3 166 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 SIRPDQ9H106 197 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 ESM1Q9NQ30 184 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 TIGARQ9NQ88 270 aa4.3□□□□□ -1.72
VPS26A-206ENST00000489794 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.3□□□□□ -1.72
VPS26A-206ENST00000489794 RCOR3Q9P2K3 495 aaPredicted RBP4.3□□□□□ -1.72
VPS26A-206ENST00000489794 ZMYM6O95789 1325 aa4.29□□□□□ -1.72
VPS26A-206ENST00000489794 ZSCAN5CA6NGD5 496 aaPredicted RBP4.29□□□□□ -1.72
VPS26A-206ENST00000489794 PHOX2AO14813 284 aa4.29□□□□□ -1.72
VPS26A-206ENST00000489794 THY1P04216 161 aa4.29□□□□□ -1.72
VPS26A-206ENST00000489794 ALPPP05187 535 aa4.29□□□□□ -1.72
VPS26A-206ENST00000489794 PROS1P07225 676 aa4.29□□□□□ -1.72
VPS26A-206ENST00000489794 HOXB7P09629 217 aa4.29□□□□□ -1.72
VPS26A-206ENST00000489794 ALPPL2P10696 532 aa4.29□□□□□ -1.72
VPS26A-206ENST00000489794 PVRP15151 417 aa4.29□□□□□ -1.72
VPS26A-206ENST00000489794 IL10P22301 178 aa4.29□□□□□ -1.72
VPS26A-206ENST00000489794 IGFBP5P24593 272 aa4.29□□□□□ -1.72
VPS26A-206ENST00000489794 SFNP31947 248 aa4.29□□□□□ -1.72
VPS26A-206ENST00000489794 CSRP3P50461 194 aa4.29□□□□□ -1.72
VPS26A-206ENST00000489794 SGSHP51688 502 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms