RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 EXOSC8Q96B26 276 aaKnown RBP10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 CTHRC1Q96CG8 243 aa10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 C14orf79Q96F83 325 aa10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 LCORQ96JN0 433 aaPredicted RBP10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 SECISBP2Q96T21 854 aaKnown RBP10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 TREX2Q9BQ50 279 aaPredicted RBP10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 EBPLQ9BY08 206 aa10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 GSTO2Q9H4Y5 243 aa10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 METTL7AQ9H8H3 244 aa10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 ANKRA2Q9H9E1 313 aa10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 MID1IP1Q9NPA3 183 aa10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 EHD3Q9NZN3 535 aa10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 CFL2Q9Y281 166 aa10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 STK38LQ9Y2H1 464 aa10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 ZNF407Q9C0G0 2248 aa10.93□□□□□ -0.66
CCHCR1-215ENST00000488920 PDZD2O15018 2839 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 CCDC151A5D8V7 595 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 SMIM23A6NLE4 172 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 GNB5O14775 395 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 PPM1BO75688 479 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 HOXD4P09016 255 aaPredicted RBP10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 DRD2P14416 443 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 GABRA1P14867 456 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 NAGAP17050 411 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 IGFBP2P18065 325 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 DRD5P21918 477 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 MSX1P28360 303 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 PPICP45877 212 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 ZFP36L2P47974 494 aaKnown RBP10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 EMDP50402 254 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 CDK9P50750 372 aaKnown RBP10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 NAGLUP54802 743 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 FOXA1P55317 472 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 SPIN4Q56A73 249 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 ZYG11AQ6WRX3 759 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 SH2D5Q6ZV89 423 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 NUP54Q7Z3B4 507 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 ULK2Q8IYT8 1036 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 OR9A2Q8NGT5 310 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 UBLCP1Q8WVY7 318 aaPredicted RBP10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 HGDQ93099 445 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 TRIM44Q96DX7 344 aaPredicted RBP10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 OMA1Q96E52 524 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 NODALQ96S42 347 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 TIMP4Q99727 224 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 C12orf65Q9H3J6 166 aaKnown RBP10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 PRODH2Q9UF12 536 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 C15orf41Q9Y2V0 281 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 SLC6A5Q9Y345 797 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 TACC2O95359 2948 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 CSMD2Q7Z408 3487 aa10.92□□□□□ -0.66
CCHCR1-215ENST00000488920 OTOGQ6ZRI0 2925 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 EML6Q6ZMW3 1958 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 ACOX3O15254 700 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 ICOSLGO75144 302 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 UGT2B11O75310 529 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 GLRA3O75311 464 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 PROCP04070 461 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 HPNP05981 417 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 ANXA4P09525 319 aaPredicted RBP10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 TIA1P31483 386 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 WNT3P56703 355 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 DCAF7P61962 342 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 PLCXD2Q0VAA5 305 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 HEPACAMQ14CZ8 416 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 EIPR1Q53HC9 387 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 ZNF628Q5EBL2 1059 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 WIPI1Q5MNZ9 446 aaPredicted RBP10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 TIGD3Q6B0B8 471 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 ANGPTL8Q6UXH0 198 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 SEM1Q6ZVN7 128 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 DMRTC2Q8IXT2 367 aaPredicted RBP10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 CDC26Q8NHZ8 85 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 TMBIM1Q969X1 311 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 NTNG2Q96CW9 530 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 CCDC126Q96EE4 140 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 HSPBAP1Q96EW2 488 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 C11orf24Q96F05 449 aaPredicted RBP10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 TMEM41AQ96HV5 264 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 SHCBP1LQ9BZQ2 653 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 UBQLN3Q9H347 655 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 MCCC2Q9HCC0 563 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 GALNT9Q9HCQ5 603 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 SLC35C2Q9NQQ7 365 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 ITGB1BP2Q9UKP3 347 aa10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 GPR55Q9Y2T6 319 aaPredicted RBP10.91□□□□□ -0.66
CCHCR1-215ENST00000488920 SERTM1A2A2V5 107 aa10.9□□□□□ -0.66
CCHCR1-215ENST00000488920 FRG2CA6NGY1 282 aa10.9□□□□□ -0.66
CCHCR1-215ENST00000488920 AHRRA9YTQ3 701 aa10.9□□□□□ -0.66
CCHCR1-215ENST00000488920 KDM4EB2RXH2 506 aaPredicted RBP10.9□□□□□ -0.66
CCHCR1-215ENST00000488920 FAM47E-STBD1D6RA91 191 aa10.9□□□□□ -0.66
CCHCR1-215ENST00000488920 PLIN3O60664 434 aa10.9□□□□□ -0.66
CCHCR1-215ENST00000488920 CRCPO75575 148 aa10.9□□□□□ -0.66
CCHCR1-215ENST00000488920 REM1O75628 298 aa10.9□□□□□ -0.66
CCHCR1-215ENST00000488920 CPA3P15088 417 aa10.9□□□□□ -0.66
CCHCR1-215ENST00000488920 BMP7P18075 431 aa10.9□□□□□ -0.66
CCHCR1-215ENST00000488920 PTPN6P29350 595 aa10.9□□□□□ -0.66
CCHCR1-215ENST00000488920 CRHR1P34998 444 aa10.9□□□□□ -0.66
CCHCR1-215ENST00000488920 PTGDSP41222 190 aa10.9□□□□□ -0.66
CCHCR1-215ENST00000488920 CCT5P48643 541 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms