RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 HOXB13Q92826 284 aaPredicted RBP17.94■□□□□ 0.46
PCOLCE-208ENST00000487172 UBL7Q96S82 380 aaPredicted RBP17.94■□□□□ 0.46
PCOLCE-208ENST00000487172 FOLH1BQ9HBA9 442 aa17.94■□□□□ 0.46
PCOLCE-208ENST00000487172 ZBTB20Q9HC78 741 aaPredicted RBP17.94■□□□□ 0.46
PCOLCE-208ENST00000487172 SERHLQ9NQF3 203 aa17.94■□□□□ 0.46
PCOLCE-208ENST00000487172 DTX4Q9Y2E6 619 aa17.94■□□□□ 0.46
PCOLCE-208ENST00000487172 GPR55Q9Y2T6 319 aaPredicted RBP17.94■□□□□ 0.46
PCOLCE-208ENST00000487172 CACNA1BQ00975 2339 aa17.94■□□□□ 0.46
PCOLCE-208ENST00000487172 NUP214P35658 2090 aaPredicted RBP17.94■□□□□ 0.46
PCOLCE-208ENST00000487172 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 A0A1W2PP18 115 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 PDGFAP04085 211 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 ABCB1P08183 1280 aaPredicted RBP17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 DRD5P21918 477 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 UQCRC2P22695 453 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 PSPHP78330 225 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 KLF10Q13118 480 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 TLR1Q15399 786 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 TIGD2Q4W5G0 525 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 BHLHB9Q6PI77 547 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 BEST3Q8N1M1 668 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 OR56A1Q8NGH5 318 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 OR4A15Q8NGL6 344 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 VPS33AQ96AX1 596 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 HSPBAP1Q96EW2 488 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 GIMAP5Q96F15 307 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 ITCHQ96J02 903 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 MAGED4Q96JG8 741 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 LCORQ96JN0 433 aaPredicted RBP17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 BTBD9Q96Q07 612 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 PANX1Q96RD7 426 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 GAL3ST4Q96RP7 486 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 RASL10BQ96S79 203 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 LMF2Q9BU23 707 aaKnown RBP17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 ITPAQ9BY32 194 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 NMUR2Q9GZQ4 415 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 TRIM45Q9H8W5 580 aaPredicted RBP17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 LIN28AQ9H9Z2 209 aaKnown RBP17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 ZCCHC3Q9NUD5 404 aaKnown RBP17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 TP53TG5Q9Y2B4 290 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 SNX8Q9Y5X2 465 aa17.93■□□□□ 0.46
PCOLCE-208ENST00000487172 K7EM74 188 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 WWP2O00308 870 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 TO15178 435 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 OR2J2O76002 312 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 NADKO95544 446 aaPredicted RBP17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 ZCCHC18P0CG32 403 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 CAPN3P20807 821 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 MAP3K8P41279 467 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 TRPC1P48995 793 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 UBAP2LQ14157 1087 aaKnown RBP17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 LACTB2Q53H82 288 aaPredicted RBP17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 EXOSC6Q5RKV6 272 aaKnown RBP17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 C16orf47Q6ZP98 133 aaPredicted RBP17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 TAGAPQ8N103 731 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 TRIML2Q8N7C3 387 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 ANKS4BQ8N8V4 417 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 SLC22A8Q8TCC7 542 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 GTF2H4Q92759 462 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 MS4A4EQ96PG1 132 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 PHF12Q96QT6 1004 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 NXF5Q9H1B4 397 aaKnown RBP17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 SLC25A18Q9H1K4 315 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 ARL2BPQ9Y2Y0 163 aa17.92■□□□□ 0.46
PCOLCE-208ENST00000487172 TNRC6AQ8NDV7 1962 aaKnown RBP17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 FRG2CA6NGY1 282 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 NR5A2O00482 541 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 RFXANKO14593 260 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 ACOX3O15254 700 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 DPM1O60762 260 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 ERN1O75460 977 aaKnown RBP17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 SOX30O94993 753 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 WDPCPO95876 746 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 SNRPB2P08579 225 aaKnown RBP17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 CT45A8P0DMV1 189 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 CT45A9P0DMV2 189 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 CD1EP15812 388 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 PRIM2P49643 509 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 HLCSP50747 726 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 SSR4P51571 173 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 NR0B1P51843 470 aaKnown RBP17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 PRKAG1P54619 331 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 PSG6Q00889 435 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 SPDYE7PQ495Y7 208 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 VPS26BQ4G0F5 336 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 CT45A2Q5DJT8 189 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 MFSD12Q6NUT3 480 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 GK5Q6ZS86 529 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 ASB18Q6ZVZ8 466 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 GPALPP1Q8IXQ4 340 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 DND1Q8IYX4 353 aaKnown RBP17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 ZADH2Q8N4Q0 377 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 CDRT4Q8N9R6 151 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 INPP5KQ9BT40 448 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 MYLK2Q9H1R3 596 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 GIN1Q9NXP7 522 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 VPS4AQ9UN37 437 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 NDUFAF1Q9Y375 327 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 CACNA1GO43497 2377 aa17.91■□□□□ 0.46
PCOLCE-208ENST00000487172 CFAP47Q6ZTR5 3102 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms