RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 TRIM23P36406 574 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 HSF2Q03933 536 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 PAX8Q06710 450 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 ITPK1Q13572 414 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 CNPY1Q3B7I2 92 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 ACSF3Q4G176 576 aaPredicted RBP3.7□□□□□ -1.82
SMC4-218ENST00000486711 WDR25Q64LD2 544 aaPredicted RBP3.7□□□□□ -1.82
SMC4-218ENST00000486711 EMBQ6PCB8 327 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 PAQR6Q6TCH4 344 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 ABRAXAS1Q6UWZ7 409 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 APOOLQ6UXV4 268 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 CCDC71Q8IV32 467 aaPredicted RBP3.7□□□□□ -1.82
SMC4-218ENST00000486711 PHC2Q8IXK0 858 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 ABHD12Q8N2K0 398 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 BCORP1Q8N888 145 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 C4orf32Q8N8J7 132 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 ZNRF1Q8ND25 227 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 OR52B4Q8NGK2 314 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 GIPC3Q8TF64 312 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 SELENOMQ8WWX9 145 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 CCDC51Q96ER9 411 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 APOOQ9BUR5 198 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 GPR174Q9BXC1 333 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 RNF41Q9H4P4 317 aaPredicted RBP3.7□□□□□ -1.82
SMC4-218ENST00000486711 RPAP3Q9H6T3 665 aaPredicted RBP3.7□□□□□ -1.82
SMC4-218ENST00000486711 ACTR8Q9H981 624 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 IL1RL2Q9HB29 575 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 YAE1D1Q9NRH1 226 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 SLC7A10Q9NS82 523 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 GDAP2Q9NXN4 497 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 EPS15L1Q9UBC2 864 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 ZNF346Q9UL40 294 aaKnown RBP3.7□□□□□ -1.82
SMC4-218ENST00000486711 FZR1Q9UM11 496 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 SPATA2Q9UM82 520 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 KLHDC2Q9Y2U9 406 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 SYNJ2O15056 1496 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 ABCC4O15439 1325 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 SALL1Q9NSC2 1324 aa3.7□□□□□ -1.82
SMC4-218ENST00000486711 A0A1B0GTH9 108 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 ANKRD30BLA7E2S9 258 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 EPM2AB3EWF7 344 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 NOL3O60936 208 aaKnown RBP3.69□□□□□ -1.82
SMC4-218ENST00000486711 PDE5AO76074 875 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 ECDO95905 644 aaPredicted RBP3.69□□□□□ -1.82
SMC4-218ENST00000486711 SLC35G4P0C7Q5 338 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 FUT1P19526 365 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 RAG2P55895 527 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 IL9RQ01113 521 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 PDZK1IP1Q13113 114 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 ZSWIM7Q19AV6 140 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 ANKRD55Q3KP44 614 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 LRIT3Q3SXY7 679 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 ARMCX5Q6P1M9 558 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 AFTPHQ6ULP2 937 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 ATRAIDQ6UW56 229 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 PAQR9Q6ZVX9 377 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 LRRC49Q8IUZ0 686 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 ARL14Q8N4G2 192 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 TEX9Q8N6V9 391 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 OR52J3Q8NH60 311 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 RSPH1Q8WYR4 309 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 LHX4Q969G2 390 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 BIRC7Q96CA5 298 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 FICDQ9BVA6 458 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 ALG9Q9H6U8 611 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 ECT2Q9H8V3 914 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 PAK5Q9P286 719 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 P2RX2Q9UBL9 471 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 MRPL11Q9Y3B7 192 aaKnown RBP3.69□□□□□ -1.82
SMC4-218ENST00000486711 U3KQV3 271 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 NCAPD2Q15021 1401 aa3.69□□□□□ -1.82
SMC4-218ENST00000486711 E9PMD0 336 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 F8WDY8 70 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 H3BTX0 84 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 SGK494L7N484 410 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 PDXKO00764 312 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 MCF2LO15068 1137 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 CLDN3O15551 220 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 RANBP6O60518 1105 aaKnown RBP3.68□□□□□ -1.82
SMC4-218ENST00000486711 VPS26AO75436 327 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 NDUFA7O95182 113 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 GOT2P00505 430 aaKnown RBP3.68□□□□□ -1.82
SMC4-218ENST00000486711 MT-ND1P03886 318 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 CCDC159P0C7I6 412 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 CYP11B1P15538 503 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 TNNI3P19429 210 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 AZU1P20160 251 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 IL4RP24394 825 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 HPDP32754 393 aaPredicted RBP3.68□□□□□ -1.82
SMC4-218ENST00000486711 SAA4P35542 130 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 VCPP55072 806 aaKnown RBP3.68□□□□□ -1.82
SMC4-218ENST00000486711 DSCR10P59022 87 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 TRA2BP62995 288 aaKnown RBP3.68□□□□□ -1.82
SMC4-218ENST00000486711 CD300CQ08708 224 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 ZKSCAN8Q15776 578 aaPredicted RBP3.68□□□□□ -1.82
SMC4-218ENST00000486711 TMEM44Q2T9K0 475 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 ZNF699Q32M78 642 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 GLIPR1L2Q4G1C9 344 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 VWA2Q5GFL6 755 aa3.68□□□□□ -1.82
SMC4-218ENST00000486711 BEND6Q5SZJ8 279 aaPredicted RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms