RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 HMGN2P05204 90 aaKnown RBP13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 BCHEP06276 602 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 CPMP14384 443 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 PORP16435 677 aaPredicted RBP13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 ALDH3A2P51648 485 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 ARHGDIAP52565 204 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 PRKAG1P54619 331 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 ARSFP54793 590 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 EMP3P54852 163 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 VLDLRP98155 873 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 DAG1Q14118 895 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 GPR19Q15760 415 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 IFI44LQ53G44 452 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 NHSL2Q5HYW2 709 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 OR2T5Q6IEZ7 315 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 HIPK1Q86Z02 1210 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 ARMC8Q8IUR7 673 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 OR5T3Q8NGG3 340 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 OR9A4Q8NGU2 314 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 OR2T29Q8NH02 315 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 SNIP1Q8TAD8 396 aaKnown RBP13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 RASSF5Q8WWW0 418 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 TMEM19Q96HH6 336 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 MAGED4Q96JG8 741 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 SERHL2Q9H4I8 314 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 BATF3Q9NR55 127 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 SMPD3Q9NY59 655 aaPredicted RBP13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 TMEM9Q9P0T7 183 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 PISDQ9UG56 409 aa13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 MN1Q10571 1320 aaPredicted RBP13.67□□□□□ -0.22
POLR2J3-204ENST00000486319 URB1O60287 2271 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 A0A1W2PS29 197 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 HYKKA2RU49 373 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 FITM1A5D6W6 292 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 ASNA1O43681 348 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 RDH16O75452 317 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 PGM3O95394 542 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 NSA2O95478 260 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 GPR75O95800 540 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 OPN1SWP03999 348 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 IFI6P09912 130 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 OR12D1P0DN82 309 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 EIF2S3P41091 472 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 MC3RP41968 323 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 ARL4DP49703 201 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 ITGA1P56199 1179 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 HSD11B2P80365 405 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 LASP1Q14847 261 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 SNAP47Q5SQN1 464 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 STK32CQ86UX6 486 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 KMT5CQ86Y97 462 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 LGI4Q8N135 537 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 SPPL2AQ8TCT8 520 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 XAGE5Q8WWM1 108 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 RAB8BQ92930 207 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 COL26A1Q96A83 441 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 C7orf34Q96L11 122 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 RDH12Q96NR8 316 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 ZNF607Q96SK3 696 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 OSBPL10Q9BXB5 764 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 ENAMQ9NRM1 1142 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 DDX18Q9NVP1 670 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 IRAK4Q9NWZ3 460 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 USE1Q9NZ43 259 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 NTMQ9P121 344 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 PTGFRNQ9P2B2 879 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 IFT80Q9P2H3 777 aaPredicted RBP13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 PDP2Q9P2J9 529 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 KLHL3Q9UH77 587 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 ABCG2Q9UNQ0 655 aa13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 MRPS33Q9Y291 106 aaKnown RBP13.66□□□□□ -0.22
POLR2J3-204ENST00000486319 A0A087WV48 116 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 A0A0A6YYC8 382 aaPredicted RBP13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 A8MU76 341 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 CDRT15L2A8MXV6 281 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 TMEM229AB2RXF0 380 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 I3L1I5 382 aaPredicted RBP13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 hCG_2039718K7EN88 272 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 CHST10O43529 356 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 SLC28A2O43868 658 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 SERPINB7O75635 380 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 ATP1B1P05026 303 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 CTSBP07858 339 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 NR2F1P10589 423 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 ITGA2P17301 1181 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 ITIH1P19827 911 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 CSTF2P33240 577 aaKnown RBP eCLIP13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 DCTP40126 519 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 AVPR1BP47901 424 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 CRISP3P54108 245 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 MERTKQ12866 999 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 EPS8Q12929 822 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 GRM7Q14831 915 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 LTB4RQ15722 352 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 OTUD3Q5T2D3 398 aaPredicted RBP13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 SHQ1Q6PI26 577 aaKnown RBP13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 TBPL2Q6SJ96 375 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 LRRC69Q6ZNQ3 347 aa13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 SLC44A2Q8IWA5 706 aaPredicted RBP13.65□□□□□ -0.22
POLR2J3-204ENST00000486319 CHERPQ8IWX8 916 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms