RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 SPNS1Q9H2V7 528 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 ZNF385DQ9H6B1 395 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 AKTIPQ9H8T0 292 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 SAR1AQ9NR31 198 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 KCMF1Q9P0J7 381 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 TAC3Q9UHF0 121 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 ACAD8Q9UKU7 415 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 CCL27Q9Y4X3 112 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 KCNE2Q9Y6J6 123 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 USF3Q68DE3 2245 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 CR1P17927 2039 aa9.04□□□□□ -0.96
SND1-213ENST00000486037 ZNF860A6NHJ4 632 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 H0YIG0 161 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 AQP7O14520 342 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 PRKNO60260 465 aaPredicted RBP9.03□□□□□ -0.96
SND1-213ENST00000486037 CCDC22O60826 627 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 NSA2O95478 260 aaKnown RBP9.03□□□□□ -0.96
SND1-213ENST00000486037 PDYNP01213 254 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 IFNA2P01563 188 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 SERPINA6P08185 405 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 C1GALT1C1LP0DN25 315 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 CDH1P12830 882 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 GNAZP19086 355 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 CMPK1P30085 196 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 BCL6P41182 706 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 HNF4AP41235 474 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 ZNF136P52737 540 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 DMTNQ08495 405 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 TBCCQ15814 346 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 GALNTL6Q49A17 601 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 SGO1Q5FBB7 561 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 SPDYAQ5MJ70 313 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 METTL21CQ5VZV1 264 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 FAM91A1Q658Y4 838 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 ADNP2Q6IQ32 1131 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 GRHL2Q6ISB3 625 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 HEPHL1Q6MZM0 1159 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 PAOXQ6QHF9 649 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 VN1R4Q7Z5H5 301 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 TREML1Q86YW5 311 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 HIPK1Q86Z02 1210 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 ARMC10Q8N2F6 343 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 RNF175Q8N4F7 328 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 PSD4Q8NDX1 1056 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 OR5T3Q8NGG3 340 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 CEP70Q8NHQ1 597 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 TUBGCP3Q96CW5 907 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 PEX11GQ96HA9 241 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 MARK4Q96L34 752 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 HAUS8Q9BT25 410 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 CCDC106Q9BWC9 280 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 PCBD2Q9H0N5 130 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 LIN28AQ9H9Z2 209 aaKnown RBP9.03□□□□□ -0.96
SND1-213ENST00000486037 MRPS30Q9NP92 439 aaKnown RBP9.03□□□□□ -0.96
SND1-213ENST00000486037 ARMCX1Q9P291 453 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 ZFP69BQ9UJL9 534 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 ZNF223Q9UK11 482 aaPredicted RBP9.03□□□□□ -0.96
SND1-213ENST00000486037 ZNF490Q9ULM2 529 aaPredicted RBP9.03□□□□□ -0.96
SND1-213ENST00000486037 TGP01266 2768 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 NCKAP5O14513 1909 aa9.03□□□□□ -0.96
SND1-213ENST00000486037 HSPB2A8KAH6 182 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 A8MUA0 341 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 CAPN14A8MX76 684 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 MAGEB17A8MXT2 336 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 H0YIV9 168 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 CDK2AP1O14519 115 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 DVL2O14641 736 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 ITGA10O75578 1167 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 KRT6AP02538 564 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 KRT6BP04259 564 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 ALDOCP09972 364 aaKnown RBP9.02□□□□□ -0.97
SND1-213ENST00000486037 NCF2P19878 526 aaPredicted RBP9.02□□□□□ -0.97
SND1-213ENST00000486037 CEACAM8P31997 349 aaPredicted RBP9.02□□□□□ -0.97
SND1-213ENST00000486037 KRT6CP48668 564 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 NEK2P51955 445 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 HMGCS1Q01581 520 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 MEF2AQ02078 507 aaPredicted RBP9.02□□□□□ -0.97
SND1-213ENST00000486037 TNK1Q13470 666 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 SLBPQ14493 270 aaKnown RBP eCLIP9.02□□□□□ -0.97
SND1-213ENST00000486037 HSPB2Q16082 182 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 FRG2Q64ET8 278 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 ICE2Q659A1 982 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 TRIM46Q7Z4K8 759 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 C17orf64Q86WR6 236 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 APCDD1LQ8NCL9 501 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 ZNF740Q8NDX6 193 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 ZCCHC10Q8TBK6 192 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 WDR20Q8TBZ3 569 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 SELENOMQ8WWX9 145 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 RERGQ96A58 199 aaPredicted RBP9.02□□□□□ -0.97
SND1-213ENST00000486037 PTCD3Q96EY7 689 aaKnown RBP9.02□□□□□ -0.97
SND1-213ENST00000486037 FRG2BQ96QU4 278 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 CCL19Q99731 98 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 CCT7Q99832 543 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 PIGQQ9BRB3 760 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 C19orf24Q9BVV8 132 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 EHD1Q9H4M9 534 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 PELI2Q9HAT8 420 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 ARL8BQ9NVJ2 186 aa9.02□□□□□ -0.97
SND1-213ENST00000486037 SNX6Q9UNH7 406 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms