RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TMEM198Q66K66 360 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 FAM71E1Q6IPT2 247 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 FAM111BQ6SJ93 734 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 LYPD4Q6UWN0 246 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 FAM47EQ6ZV65 393 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 TRILQ7L0X0 811 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 TICAM1Q8IUC6 712 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 GSPT2Q8IYD1 628 aaKnown RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 TMEM251Q8N6I4 163 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 CCNYL1Q8N7R7 359 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 ACBD4Q8NC06 268 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 OR6Y1Q8NGX8 325 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 EPS8L3Q8TE67 593 aaKnown RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 APIPQ96GX9 242 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 LCORQ96JN0 433 aaPredicted RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 CCT7Q99832 543 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 TP63Q9H3D4 680 aaPredicted RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 RUBCNLQ9H714 662 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 SLC35C2Q9NQQ7 365 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 SENP1Q9P0U3 644 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 HEY2Q9UBP5 337 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 PRODH2Q9UF12 536 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 TINAGQ9UJW2 476 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 UTS2RQ9UKP6 389 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 RAB21Q9UL25 225 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 BOKQ9UMX3 212 aaPredicted RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 GPR55Q9Y2T6 319 aaPredicted RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 TIMM22Q9Y584 194 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 HRH3Q9Y5N1 445 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.44□□□□□ -1.38
VPS50-218ENST00000485994 ADGRG4Q8IZF6 3080 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 NCKAP5O14513 1909 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 MED12Q93074 2177 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 APCP25054 2843 aa6.44□□□□□ -1.38
VPS50-218ENST00000485994 HCFC1P51610 2035 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 ABCA12Q86UK0 2595 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 TLDC2A0PJX2 215 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 TTC36A6NLP5 189 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.43□□□□□ -1.38
VPS50-218ENST00000485994 FOXO6A8MYZ6 492 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 SLC28A1O00337 649 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 PLOD2O00469 737 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 HNRNPRO43390 633 aaKnown RBP6.43□□□□□ -1.38
VPS50-218ENST00000485994 PCDH7O60245 1069 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 NPHS1O60500 1241 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 PPM1BO75688 479 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 CLDN14O95500 239 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 IL3P08700 152 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 NT5EP21589 574 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 GPX3P22352 226 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 ABCD3P28288 659 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 FEN1P39748 380 aaKnown RBP6.43□□□□□ -1.38
VPS50-218ENST00000485994 CASP3P42574 277 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 SLCO1A2P46721 670 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 HTR6P50406 440 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 FOXA1P55317 472 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 GPR85P60893 370 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 HMGCS1Q01581 520 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 PLGLB1Q02325 96 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 ZNF763Q0D2J5 394 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 PCLAFQ15004 111 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 RPS6KA2Q15349 733 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 UGT3A2Q3SY77 523 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 ZNF628Q5EBL2 1059 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 TNFAIP8L3Q5GJ75 292 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 TCHHL1Q5QJ38 904 aaPredicted RBP6.43□□□□□ -1.38
VPS50-218ENST00000485994 NOXRED1Q6NXP6 359 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 SLC30A6Q6NXT4 461 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 Q6ZSR9 355 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 IKBIPQ70UQ0 350 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 C10orf107Q8IVU9 208 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 CCDC116Q8IYX3 515 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 CLYBLQ8N0X4 340 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 LILRB4Q8NHJ6 448 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 SPPL2AQ8TCT8 520 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 RNF138Q8WVD3 245 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 ASB5Q8WWX0 329 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 SARAFQ96BY9 339 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 TMEM41AQ96HV5 264 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 FCRL1Q96LA6 429 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 BTBD9Q96Q07 612 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 TREX2Q9BQ50 279 aaPredicted RBP6.43□□□□□ -1.38
VPS50-218ENST00000485994 GATA5Q9BWX5 397 aaPredicted RBP6.43□□□□□ -1.38
VPS50-218ENST00000485994 NXF5Q9H1B4 397 aaKnown RBP6.43□□□□□ -1.38
VPS50-218ENST00000485994 DEFB127Q9H1M4 99 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 UBQLN3Q9H347 655 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 EML4Q9HC35 981 aaKnown RBP6.43□□□□□ -1.38
VPS50-218ENST00000485994 MYNNQ9NPC7 610 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 TUBA8Q9NY65 449 aaPredicted RBP6.43□□□□□ -1.38
VPS50-218ENST00000485994 NTMQ9P121 344 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 TMED5Q9Y3A6 229 aa6.43□□□□□ -1.38
VPS50-218ENST00000485994 MRPS18CQ9Y3D5 142 aaKnown RBP6.43□□□□□ -1.38
VPS50-218ENST00000485994 SPG11Q96JI7 2443 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 GNG14A0A1W2PPG7 69 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 A1L4Q6 167 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 FRG2CA6NGY1 282 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 OR6C70A6NIJ9 312 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 AHRRA9YTQ3 701 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 AZIN1O14977 448 aa6.42□□□□□ -1.38
VPS50-218ENST00000485994 RGS14O43566 566 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms