RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 ZNF510Q9Y2H8 683 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 SDK2Q58EX2 2172 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 MED13Q9UHV7 2174 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 PLXNA2O75051 1894 aa3.69□□□□□ -1.82
SMARCC1-207ENST00000485833 DOCK9Q9BZ29 2069 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 TRBV4-1A0A0J9YWV2 114 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 A0A1B0GUA9 196 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 TRBC2A0A5B9 178 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 ACOD1A6NK06 481 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 A8MXK9 166 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 E7EWF7 191 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 ATP6AP2O75787 350 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 AZU1P20160 251 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 EEF1B2P24534 225 aaKnown RBP3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 LIMK2P53671 638 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 IFI35P80217 286 aaPredicted RBP3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 KDSRQ06136 332 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 RALGDSQ12967 914 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 TRA2AQ13595 282 aaKnown RBP eCLIP3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 IGFBP7Q16270 282 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 C9orf152Q5JTZ5 239 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 SLC25A30Q5SVS4 291 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 SDHAF4Q5VUM1 108 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 MIER3Q7Z3K6 550 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 DNAJB7Q7Z6W7 309 aaPredicted RBP3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 IQCHQ86VS3 1027 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 CMTM8Q8IZV2 173 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 ABHD12Q8N2K0 398 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 CNNM3Q8NE01 707 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 EXOC6Q8TAG9 804 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 KCNE4Q8WWG9 221 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 METTL21AQ8WXB1 218 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 PROX1Q92786 737 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 NXPE2Q96DL1 559 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 CCDC51Q96ER9 411 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 OTUB1Q96FW1 271 aaPredicted RBP3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 MED8Q96G25 268 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 CEP170P1Q96L14 293 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 LINC00615Q96LM1 132 aaPredicted RBP3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 TCEANC2Q96MN5 208 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 TRIM9Q9C026 710 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 PARLQ9H300 379 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 ECT2Q9H8V3 914 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 GNB4Q9HAV0 340 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 POLD4Q9HCU8 107 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 BCCIPQ9P287 314 aaKnown RBP eCLIP3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 CTSZQ9UBR2 303 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 APCP25054 2843 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 SCN1AP35498 2009 aa3.68□□□□□ -1.82
SMARCC1-207ENST00000485833 TRAV24A0A0B4J272 114 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 SMIM28A0A1B0GU29 152 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 A0A1W2PNU3 283 aaPredicted RBP3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 MTMR11A4FU01 709 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 G3V2L1 256 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 K7EQD1 137 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 CCL24O00175 119 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 RRP8O43159 456 aaKnown RBP3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 BCL2L11O43521 198 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 SPRY1O43609 319 aaPredicted RBP3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 SLC37A4O43826 429 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 ITIH1P19827 911 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 MC5RP33032 325 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 CAPGP40121 348 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 RIPPLY3P57055 190 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 DCDC1P59894 354 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 OSTNP61366 133 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 RASGEF1BQ0VAM2 473 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 PEX6Q13608 980 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 OPCMLQ14982 345 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 FAM189A2Q15884 450 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 ZNF77Q15935 545 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 LINC00303Q3SY05 128 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 HIGD2BQ4VC39 106 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 HES3Q5TGS1 186 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 TPGS2Q68CL5 300 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 KRT39Q6A163 491 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 GPR139Q6DWJ6 353 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 CENPPQ6IPU0 288 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 Q6ZR54 194 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 PRPF39Q86UA1 669 aaKnown RBP3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 FAM131BQ86XD5 332 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 EFCAB13Q8IY85 973 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 ELMOD1Q8N336 334 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 FBXL16Q8N461 479 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 LEMD2Q8NC56 503 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 OR10T2Q8NGX3 314 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 NPRL2Q8WTW4 380 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 PSMG2Q969U7 264 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 TSACCQ96A04 125 aaPredicted RBP3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 CYP2S1Q96SQ9 504 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 TEKT3Q9BXF9 490 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 GPN1Q9HCN4 374 aaPredicted RBP3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 DNAJC4Q9NNZ3 241 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 TXNDC16Q9P2K2 825 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 TUBGCP4Q9UGJ1 667 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 RP1L1Q8IWN7 2480 aaPredicted RBP3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 CCDC168Q8NDH2 2452 aa3.67□□□□□ -1.82
SMARCC1-207ENST00000485833 HIVEP3Q5T1R4 2406 aa3.66□□□□□ -1.82
SMARCC1-207ENST00000485833 IGHV4-30-2A0A087WSY4 118 aa3.66□□□□□ -1.82
SMARCC1-207ENST00000485833 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms