RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 GLSO94925 669 aaPredicted RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 SNUPNO95149 360 aaKnown RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 CBX7O95931 251 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 SP1P08047 785 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 STSP08842 583 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 H2AFXP16104 143 aaPredicted RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 PORP16435 677 aaPredicted RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 GNLYP22749 145 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 TIA1P31483 386 aaKnown RBP eCLIP5.28□□□□□ -1.56
CUX1-208ENST00000485792 GATA4P43694 442 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 CYB561P49447 251 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 EMDP50402 254 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 RAP1GDS1P52306 607 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 MAPK12P53778 367 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 C21orf58P58505 322 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 PLIN5Q00G26 463 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 FOXO1Q12778 655 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 STX4Q12846 297 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 PDE7AQ13946 482 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 EBPQ15125 230 aaKnown RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 TTMPQ5BVD1 217 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 CCNYL2Q5T2Q4 361 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 MFSD4BQ5TF39 518 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 IRAK1BP1Q5VVH5 260 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 SPINK14Q6IE38 97 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 CYP20A1Q6UW02 462 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 HSDL2Q6YN16 418 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 BNC2Q6ZN30 1099 aaPredicted RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 Q6ZPB1 254 aaPredicted RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 MDGA2Q7Z553 956 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 MYLK4Q86YV6 388 aaPredicted RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 GPALPP1Q8IXQ4 340 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 LRRC34Q8IZ02 419 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 CLYBLQ8N0X4 340 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 CISD2Q8N5K1 135 aaKnown RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 GOLM1Q8NBJ4 401 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 OR4K14Q8NGD5 310 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 UBASH3BQ8TF42 649 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 C16orf78Q8WTQ4 265 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 THAP3Q8WTV1 239 aaPredicted RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 NR4A3Q92570 626 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 ARL8AQ96BM9 186 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 PPWD1Q96BP3 646 aaKnown RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 RBM18Q96H35 190 aaKnown RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 EGLN2Q96KS0 407 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 SGCZQ96LD1 299 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 PSMG3-AS1Q96PY0 264 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 CCT7Q99832 543 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 UTP23Q9BRU9 249 aaKnown RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 EBPLQ9BY08 206 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 DEFB126Q9BYW3 111 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 RTN4RQ9BZR6 473 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 MRPL18Q9H0U6 180 aaKnown RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 CLMPQ9H6B4 373 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 MYNNQ9NPC7 610 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 ZNF446Q9NWS9 450 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 MAT2BQ9NZL9 334 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 LRFN1Q9P244 771 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 ZDHHC2Q9UIJ5 367 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 SLC12A4Q9UP95 1085 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 TRAF6Q9Y4K3 522 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 LIPGQ9Y5X9 500 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 COPG1Q9Y678 874 aaKnown RBP5.28□□□□□ -1.56
CUX1-208ENST00000485792 CLCA3PQ9Y6N3 262 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 TEX15Q9BXT5 2789 aa5.28□□□□□ -1.56
CUX1-208ENST00000485792 ABCA4P78363 2273 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 ABCA12Q86UK0 2595 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 TRBV11-1A0A0K0K1C0 115 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 LRRC3CA6NJW4 275 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 A8MUI8 341 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 KDM4EB2RXH2 506 aaPredicted RBP5.27□□□□□ -1.57
CUX1-208ENST00000485792 PLOD2O00469 737 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 TO15178 435 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 RGS16O15492 202 aaPredicted RBP5.27□□□□□ -1.57
CUX1-208ENST00000485792 SNNO75324 88 aaPredicted RBP5.27□□□□□ -1.57
CUX1-208ENST00000485792 OR2J2O76002 312 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 OR6B1O95007 311 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 LRATO95237 230 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 NAGAP17050 411 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 DDCP20711 480 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 ENDOUP21128 410 aaKnown RBP5.27□□□□□ -1.57
CUX1-208ENST00000485792 PIK3R1P27986 724 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 HMOX2P30519 316 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 SSTR4P31391 388 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 ZFP36L2P47974 494 aaKnown RBP5.27□□□□□ -1.57
CUX1-208ENST00000485792 XKP51811 444 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 TAS2R50P59544 299 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 ARG2P78540 354 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 HSF1Q00613 529 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 ACSM2AQ08AH3 577 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 ZNF763Q0D2J5 394 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 ASPHQ12797 758 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 OR1C1Q15619 314 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 NTRK2Q16620 822 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 SMU1Q2TAY7 513 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 KRT71Q3SY84 523 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 RFTN2Q52LD8 501 aaPredicted RBP5.27□□□□□ -1.57
CUX1-208ENST00000485792 ZNF628Q5EBL2 1059 aa5.27□□□□□ -1.57
CUX1-208ENST00000485792 SGO1Q5FBB7 561 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms