RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 POLDIP3Q9BY77 421 aaKnown RBP12.13□□□□□ -0.47
UBA3-210ENST00000485424 FUT8Q9BYC5 575 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 ZBTB26Q9HCK0 441 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 FARSBQ9NSD9 589 aaKnown RBP12.13□□□□□ -0.47
UBA3-210ENST00000485424 KLRF1Q9NZS2 232 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 PRODH2Q9UF12 536 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 TRPS1Q9UHF7 1281 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 NFU1Q9UMS0 254 aa12.13□□□□□ -0.47
UBA3-210ENST00000485424 DSCAMO60469 2012 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 FAM221AA4D161 298 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 PPM1BO75688 479 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 OR4F21O95013 312 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 EPPINO95925 133 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 RPS17P08708 135 aaKnown RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 CD99P14209 185 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 TSPAN8P19075 237 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 GPX3P22352 226 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 KRT20P35900 424 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 CASP3P42574 277 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 ASCL1P50553 236 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 CDK9P50750 372 aaKnown RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 DCAF7P61962 342 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 TRA2BP62995 288 aaKnown RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 CLCQ05315 142 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 CRYZQ08257 329 aaKnown RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 SNTB1Q13884 538 aaKnown RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 EXOSC7Q15024 291 aaKnown RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 RASA2Q15283 850 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 PRICKLE4Q2TBC4 344 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 GLE1Q53GS7 698 aaKnown RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 SLC30A6Q6NXT4 461 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 LETMD1Q6P1Q0 360 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 FAM111BQ6SJ93 734 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 ANGPTL8Q6UXH0 198 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 THSD4Q6ZMP0 1018 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 RPS27LQ71UM5 84 aaKnown RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 NUP54Q7Z3B4 507 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 TGIF2LYQ8IUE0 185 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 ZZZ3Q8IYH5 903 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 GOT1L1Q8NHS2 421 aaPredicted RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 ZNF483Q8TF39 744 aaPredicted RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 DCAKDQ8WVC6 231 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 OMA1Q96E52 524 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 LCORQ96JN0 433 aaPredicted RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 TRIB1Q96RU8 372 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 OSBPL11Q9BXB4 747 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 ITPAQ9BY32 194 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 NXF5Q9H1B4 397 aaKnown RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 LIME1Q9H400 295 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 CCM2LQ9NUG4 571 aaPredicted RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 GIMAP4Q9NUV9 329 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 SENP1Q9P0U3 644 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 VPS29Q9UBQ0 182 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 DMGDHQ9UI17 866 aaKnown RBP12.12□□□□□ -0.47
UBA3-210ENST00000485424 ST6GALNAC2Q9UJ37 374 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 STK38LQ9Y2H1 464 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 C15orf41Q9Y2V0 281 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 SLC6A5Q9Y345 797 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 TLN2Q9Y4G6 2542 aa12.12□□□□□ -0.47
UBA3-210ENST00000485424 ABCA2Q9BZC7 2435 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 GNG14A0A1W2PPG7 69 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 CCDC151A5D8V7 595 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 A8MT66 165 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 BCAS2O75934 225 aaPredicted RBP12.11□□□□□ -0.47
UBA3-210ENST00000485424 ATP1B1P05026 303 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 HPNP05981 417 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 HSD3B1P14060 373 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 NAGAP17050 411 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 HSD3B2P26439 372 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 TIMP3P35625 211 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 MAP4K2Q12851 820 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 ERCC6LQ2NKX8 1250 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 ACSF3Q4G176 576 aaPredicted RBP12.11□□□□□ -0.47
UBA3-210ENST00000485424 WIPI1Q5MNZ9 446 aaPredicted RBP12.11□□□□□ -0.47
UBA3-210ENST00000485424 UBAP2Q5T6F2 1119 aaKnown RBP12.11□□□□□ -0.47
UBA3-210ENST00000485424 C1orf52Q8N6N3 182 aaKnown RBP12.11□□□□□ -0.47
UBA3-210ENST00000485424 CDYL2Q8N8U2 506 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 TNIP2Q8NFZ5 429 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 OR52R1Q8NGF1 315 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 ABTB1Q969K4 478 aaPredicted RBP12.11□□□□□ -0.47
UBA3-210ENST00000485424 TMCO6Q96DC7 493 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 MTBPQ96DY7 904 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 HBEGFQ99075 208 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 TIMP4Q99727 224 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 GPATCH1Q9BRR8 931 aaKnown RBP12.11□□□□□ -0.47
UBA3-210ENST00000485424 MAT2BQ9NZL9 334 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 FOXD3Q9UJU5 478 aaPredicted RBP12.11□□□□□ -0.47
UBA3-210ENST00000485424 UTS2RQ9UKP6 389 aa12.11□□□□□ -0.47
UBA3-210ENST00000485424 RAI1Q7Z5J4 1906 aaPredicted RBP12.11□□□□□ -0.47
UBA3-210ENST00000485424 ACOX3O15254 700 aa12.1□□□□□ -0.47
UBA3-210ENST00000485424 ULK1O75385 1050 aa12.1□□□□□ -0.47
UBA3-210ENST00000485424 REM1O75628 298 aa12.1□□□□□ -0.47
UBA3-210ENST00000485424 ABCB1P08183 1280 aaPredicted RBP12.1□□□□□ -0.47
UBA3-210ENST00000485424 RHOXF2BP0C7M4 288 aa12.1□□□□□ -0.47
UBA3-210ENST00000485424 CYP4B1P13584 511 aa12.1□□□□□ -0.47
UBA3-210ENST00000485424 HOXB4P17483 251 aaPredicted RBP12.1□□□□□ -0.47
UBA3-210ENST00000485424 KLK2P20151 261 aa12.1□□□□□ -0.47
UBA3-210ENST00000485424 IL12BP29460 328 aa12.1□□□□□ -0.47
UBA3-210ENST00000485424 ACSM2AQ08AH3 577 aa12.1□□□□□ -0.47
UBA3-210ENST00000485424 GALNT1Q10472 559 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms