RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 RBM14Q96PK6 669 aaKnown RBP1.81□□□□□ -2.12
ITGB1-213ENST00000484088 TSGA13Q96PP4 275 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 SPAG8Q99932 426 aaPredicted RBP1.81□□□□□ -2.12
ITGB1-213ENST00000484088 GAL3ST1Q99999 423 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 SPXQ9BT56 116 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 THUMPD2Q9BTF0 503 aaKnown RBP1.81□□□□□ -2.12
ITGB1-213ENST00000484088 TRIM15Q9C019 465 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 SLC7A5P2Q9GIP4 190 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 NT5C3AQ9H0P0 336 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 TRPV6Q9H1D0 765 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 LIME1Q9H400 295 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 C8orf33Q9H7E9 229 aaPredicted RBP1.81□□□□□ -2.12
ITGB1-213ENST00000484088 NT5DC2Q9H857 520 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 MARCH7Q9H992 704 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 NMUR1Q9HB89 426 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 UBAP1Q9NZ09 502 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 CHMP5Q9NZZ3 219 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 EMC3Q9P0I2 261 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 KCNN3Q9UGI6 736 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 FAM153AQ9UHL3 310 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 MUTYHQ9UIF7 546 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 LAMP5Q9UJQ1 280 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.81□□□□□ -2.124e-6■■□□□ 13.2
ITGB1-213ENST00000484088 PRELID1Q9Y255 219 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 PLEKHA6Q9Y2H5 1048 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 TMED5Q9Y3A6 229 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 STRAPQ9Y3F4 350 aaKnown RBP1.81□□□□□ -2.12
ITGB1-213ENST00000484088 EVC2Q86UK5 1308 aa1.81□□□□□ -2.12
ITGB1-213ENST00000484088 BRD4O60885 1362 aaPredicted RBP1.81□□□□□ -2.12
ITGB1-213ENST00000484088 CFAP65Q6ZU64 1925 aaKnown RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 A0A0A6YYD4 124 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 A0A1W2PQ72 361 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 LRRIQ4A6NIV6 560 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 MEI4A8MW99 385 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 A8MXK9 166 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 SHISA9B4DS77 424 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 TCP10L2B9ZVM9 353 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 L7N2F9 121 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 AP3B1O00203 1094 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 SH2D1BO14796 132 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 ARPC1BO15143 372 aaKnown RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 YKT6O15498 198 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 TOXO94900 526 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 SLITRK3O94933 977 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 PTBP3O95758 552 aaKnown RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 GAS8O95995 478 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 PAHP00439 452 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 S100A9P06702 114 aaKnown RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 LYNP07948 512 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 RNF224P0DH78 156 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 EZRP15311 586 aaKnown RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 GATA1P15976 413 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 ZNF3P17036 446 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 CAPN2P17655 700 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 MAPK3P27361 379 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 RPA1P27694 616 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 SFNP31947 248 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 LONP1P36776 959 aaKnown RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 CD86P42081 329 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 TAF6P49848 677 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 NDST1P52848 882 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 GEMP55040 296 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 MAP3K7CLP57077 242 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 KCNK10P57789 538 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 LMO4P61968 165 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 RPS4XP62701 263 aaKnown RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 MRPS15P82914 257 aaKnown RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 CCZ1BP86790 482 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 CCZ1P86791 482 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 ZNF85Q03923 595 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 SNX1Q13596 522 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 GAMTQ14353 236 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 KRT31Q15323 416 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 LRIT3Q3SXY7 679 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 CCDC14Q49A88 953 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 CFAP221Q4G0U5 840 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 TCTEX1D4Q5JR98 221 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 MUC21Q5SSG8 566 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 ETFRF1Q6IPR1 90 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 STEAP1BQ6NZ63 245 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 OLFM4Q6UX06 510 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 METTL7BQ6UX53 244 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 ADAMTSL5Q6ZMM2 481 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 WDR88Q6ZMY6 472 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 CDHR3Q6ZTQ4 885 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 TOM1L2Q6ZVM7 507 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 BNIPLQ7Z465 357 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 KIAA1328Q86T90 577 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 YRDCQ86U90 279 aaKnown RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 MYPOPQ86VE0 399 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 TRIML2Q8N7C3 387 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 ZNF781Q8N8C0 355 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 C4orf32Q8N8J7 132 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 SUMF1Q8NBK3 374 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 BBOF1Q8ND07 529 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 ZNF397Q8NF99 534 aaPredicted RBP1.8□□□□□ -2.12
ITGB1-213ENST00000484088 OR52K1Q8NGK4 314 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 OR8K3Q8NH51 312 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 PSMA8Q8TAA3 256 aa1.8□□□□□ -2.12
ITGB1-213ENST00000484088 CCDC26Q8TAB7 109 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms