RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 NUP54Q7Z3B4 507 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 LRRC8AQ8IWT6 810 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 CTAGE4Q8IX94 777 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 PHC2Q8IXK0 858 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 MAPK1IP1LQ8NDC0 245 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 C17orf47Q8NEP4 570 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 WDR20Q8TBZ3 569 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 ZFP3Q96NJ6 502 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 NAP1L3Q99457 506 aaPredicted RBP11.66□□□□□ -0.54
UBR4-213ENST00000483922 GPR22Q99680 433 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 OPN3Q9H1Y3 402 aaPredicted RBP11.66□□□□□ -0.54
UBR4-213ENST00000483922 METTL7AQ9H8H3 244 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 FBXL2Q9UKC9 423 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 RNF112Q9ULX5 631 aa11.66□□□□□ -0.54
UBR4-213ENST00000483922 HEATR5AQ86XA9 2040 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 CBR3O75828 277 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 PLAUP00749 431 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 PAX1P15863 534 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 PTX3P26022 381 aaPredicted RBP11.65□□□□□ -0.54
UBR4-213ENST00000483922 CNTFP26441 200 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 SERPINB1P30740 379 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 SSTR1P30872 391 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 UGT2B10P36537 528 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 CD79BP40259 229 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 PIK3CGP48736 1102 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 PCYT1AP49585 367 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 XKP51811 444 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 ARFIP1P53367 373 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 PPP2R2BQ00005 443 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 GAB1Q13480 694 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 CUL3Q13618 768 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 EXOSC7Q15024 291 aaKnown RBP11.65□□□□□ -0.54
UBR4-213ENST00000483922 PRICKLE4Q2TBC4 344 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 FAM219BQ5XKK7 198 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 HLA-DQA1Q5Y7H0 255 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 ANKRD34AQ69YU3 496 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 SLC30A6Q6NXT4 461 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 GALNT12Q8IXK2 581 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 SLC35F6Q8N357 371 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 TEX9Q8N6V9 391 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 OR14L1PQ8NHC6 308 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 UBTD2Q8WUN7 234 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 FIG4Q92562 907 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 OMA1Q96E52 524 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 OSBPL11Q9BXB4 747 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 ITPAQ9BY32 194 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 LYARQ9NX58 379 aaKnown RBP11.65□□□□□ -0.54
UBR4-213ENST00000483922 RNF11Q9Y3C5 154 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 DSCAMO60469 2012 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 ROS1P08922 2347 aa11.65□□□□□ -0.54
UBR4-213ENST00000483922 H0YIV9 168 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 KLF4O43474 513 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 SMNDC1O75940 238 aaKnown RBP eCLIP11.64□□□□□ -0.55
UBR4-213ENST00000483922 SEC31AO94979 1220 aaKnown RBP11.64□□□□□ -0.55
UBR4-213ENST00000483922 CBX7O95931 251 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 RHOXF2BP0C7M4 288 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 FPR1P21462 350 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 SUCLG1P53597 346 aaKnown RBP11.64□□□□□ -0.55
UBR4-213ENST00000483922 GAS1P54826 345 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 SLC12A2P55011 1212 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 ARL4CP56559 192 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 NRG3P56975 720 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 HMGCS1Q01581 520 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 TNK1Q13470 666 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 OR5M10Q6IEU7 315 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 CYP20A1Q6UW02 462 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 CMC1Q7Z7K0 106 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 ZNF610Q8N9Z0 462 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 OR4K14Q8NGD5 310 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 PGM2Q96G03 612 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 ZC3HAV1LQ96H79 300 aaKnown RBP11.64□□□□□ -0.55
UBR4-213ENST00000483922 RBBP8Q99708 897 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 ZNF701Q9NV72 531 aaPredicted RBP11.64□□□□□ -0.55
UBR4-213ENST00000483922 TAS2R10Q9NYW0 307 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 NUDT4Q9NZJ9 180 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 OPTCQ9UBM4 332 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 ADGRE2Q9UHX3 823 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 SNX12Q9UMY4 172 aa11.64□□□□□ -0.55
UBR4-213ENST00000483922 A0A087X1B8 175 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 CES2O00748 559 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 CPMP14384 443 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 EPB42P16452 691 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 STMN1P16949 149 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 NT5EP21589 574 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 TCEA1P23193 301 aaKnown RBP11.63□□□□□ -0.55
UBR4-213ENST00000483922 CHMP24386 653 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 TMED10P49755 219 aaKnown RBP11.63□□□□□ -0.55
UBR4-213ENST00000483922 EMDP50402 254 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 DIO3P55073 304 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 RAB10P61026 200 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 MAP4K2Q12851 820 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 SNTA1Q13424 505 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 CPSF6Q16630 551 aaKnown RBP eCLIP11.63□□□□□ -0.55
UBR4-213ENST00000483922 KBTBD12Q3ZCT8 623 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 TRMT12Q53H54 448 aaKnown RBP11.63□□□□□ -0.55
UBR4-213ENST00000483922 LIPJQ5W064 366 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 OR52E8Q6IFG1 317 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 FAM180BQ6P0A1 224 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 ENPP6Q6UWR7 440 aa11.63□□□□□ -0.55
UBR4-213ENST00000483922 IFNEQ86WN2 208 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms