RNA–Protein interactions for RNA: ENST00000483873.6

GTF3C4-202, Transcript of general transcription factor IIIC subunit 4, humanhuman

TSL 3 BASIC

Gene GTF3C4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-202ENST00000483873 NOP53Q9NZM5 478 aaKnown RBP24.44■■□□□ 1.5
GTF3C4-202ENST00000483873 ATP6V1HQ9UI12 483 aa24.44■■□□□ 1.5
GTF3C4-202ENST00000483873 CFL2Q9Y281 166 aa24.44■■□□□ 1.5
GTF3C4-202ENST00000483873 PEX1O43933 1283 aa24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 CRYABP02511 175 aaKnown RBP24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 MDH1P40925 334 aaKnown RBP24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 RFC3P40938 356 aa24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 DIO3P55073 304 aa24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 KCNC4Q03721 635 aa24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 HSPB3Q12988 150 aa24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 MAD2L1Q13257 205 aaPredicted RBP24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 SMU1Q2TAY7 513 aa24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 FAM47EQ6ZV65 393 aa24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 FAM98AQ8NCA5 519 aaKnown RBP24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 C17orf47Q8NEP4 570 aa24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 DNAJB8Q8NHS0 232 aa24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 ERP27Q96DN0 273 aa24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 MTERF3Q96E29 417 aa24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 TSPAN10Q9H1Z9 355 aaPredicted RBP24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 ASIC5Q9NY37 505 aa24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 PRODH2Q9UF12 536 aa24.43■■□□□ 1.5
GTF3C4-202ENST00000483873 PINLYPA6NC86 204 aa24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 HDAC3O15379 428 aa24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 FRKP42685 505 aaPredicted RBP24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 RNFT1Q5M7Z0 435 aa24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 LARP4Q71RC2 724 aaKnown RBP eCLIP24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 R3HCC1LQ7Z5L2 792 aaKnown RBP24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 GOLM1Q8NBJ4 401 aa24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 FAM13CQ8NE31 585 aa24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 OR10G3Q8NGC4 313 aa24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 OR5M3Q8NGP4 307 aa24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 MAGED4Q96JG8 741 aa24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 SGCZQ96LD1 299 aa24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 NPFFR2Q9Y5X5 522 aa24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 FLNCQ14315 2725 aa24.42■■□□□ 1.5
GTF3C4-202ENST00000483873 BCAS2O75934 225 aaPredicted RBP24.41■■□□□ 1.5
GTF3C4-202ENST00000483873 LAMP1P11279 417 aa24.41■■□□□ 1.5
GTF3C4-202ENST00000483873 EDN3P14138 238 aa24.41■■□□□ 1.5
GTF3C4-202ENST00000483873 CDK9P50750 372 aaKnown RBP24.41■■□□□ 1.5
GTF3C4-202ENST00000483873 RIMKLAQ8IXN7 391 aa24.41■■□□□ 1.5
GTF3C4-202ENST00000483873 ST6GALNAC3Q8NDV1 305 aa24.41■■□□□ 1.5
GTF3C4-202ENST00000483873 ELP4Q96EB1 424 aa24.41■■□□□ 1.5
GTF3C4-202ENST00000483873 LCORQ96JN0 433 aaPredicted RBP24.41■■□□□ 1.5
GTF3C4-202ENST00000483873 VSTM2LQ96N03 204 aa24.41■■□□□ 1.5
GTF3C4-202ENST00000483873 WDR55Q9H6Y2 383 aaPredicted RBP24.41■■□□□ 1.5
GTF3C4-202ENST00000483873 FOLH1BQ9HBA9 442 aa24.41■■□□□ 1.5
GTF3C4-202ENST00000483873 SH2D2AQ9NP31 389 aa24.41■■□□□ 1.5
GTF3C4-202ENST00000483873 SETXQ7Z333 2677 aaKnown RBP24.41■■□□□ 1.5
GTF3C4-202ENST00000483873 A0A087WV62 115 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 GOLGA8QA0A0J9YX86 632 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 GOLGA8OA6NCC3 632 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 ANKUB1A6NFN9 424 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 GOLGA8NF8WBI6 632 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 KLRC4-KLRK1H3BQV0 150 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 UPK1AO00322 258 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 PLOD2O00469 737 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 LBPP18428 481 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 ABCD3P28288 659 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 EPHA3P29320 983 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 GYS2P54840 703 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 FBXW4P57775 412 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 NTRK2Q16620 822 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 NPSR1Q6W5P4 371 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 MAVSQ7Z434 540 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 PIWIL2Q8TC59 973 aaKnown RBP24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 ZBED6CLQ96FA7 236 aaPredicted RBP24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 CLMPQ9H6B4 373 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 CCDC134Q9H6E4 229 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 SACM1LQ9NTJ5 587 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 C19orf53Q9UNZ5 99 aaPredicted RBP24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 NINQ8N4C6 2090 aa24.4■■□□□ 1.5
GTF3C4-202ENST00000483873 SLITRK5O94991 958 aa24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 ALDOCP09972 364 aaKnown RBP24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 GPC1P35052 558 aa24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 RPL3P39023 403 aaKnown RBP24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 PPICP45877 212 aa24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 MANFP55145 182 aaKnown RBP24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 NRG3P56975 720 aa24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 CORO7P57737 925 aa24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 ALDH6A1Q02252 535 aaKnown RBP24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 EIF2S3LQ2VIR3 472 aaKnown RBP24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 PRAMEF20Q5VT98 475 aa24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 OR2L13Q8N349 312 aa24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 OR2M7Q8NG81 312 aa24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 PAQR8Q8TEZ7 354 aa24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 DDX18Q9NVP1 670 aaKnown RBP24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 GPR55Q9Y2T6 319 aaPredicted RBP24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 CHCHD2Q9Y6H1 151 aaPredicted RBP24.39■■□□□ 1.5
GTF3C4-202ENST00000483873 NUP214P35658 2090 aaPredicted RBP24.38■■□□□ 1.49
GTF3C4-202ENST00000483873 P04436 131 aa24.38■■□□□ 1.49
GTF3C4-202ENST00000483873 PRPS1L1P21108 318 aa24.38■■□□□ 1.49
GTF3C4-202ENST00000483873 PIGAP37287 484 aa24.38■■□□□ 1.49
GTF3C4-202ENST00000483873 DNASE1L1P49184 302 aa24.38■■□□□ 1.49
GTF3C4-202ENST00000483873 CLDN8P56748 225 aa24.38■■□□□ 1.49
GTF3C4-202ENST00000483873 ZNF155Q12901 538 aaPredicted RBP24.38■■□□□ 1.49
GTF3C4-202ENST00000483873 CPTPQ5TA50 214 aa24.38■■□□□ 1.49
GTF3C4-202ENST00000483873 SLC22A10Q63ZE4 541 aa24.38■■□□□ 1.49
GTF3C4-202ENST00000483873 DESI1Q6ICB0 168 aa24.38■■□□□ 1.49
GTF3C4-202ENST00000483873 SIAH3Q8IW03 269 aa24.38■■□□□ 1.49
GTF3C4-202ENST00000483873 DND1Q8IYX4 353 aaKnown RBP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms