RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 PROX2Q3B8N5 592 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 C14orf28Q4W4Y0 310 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 XAF1Q6GPH4 301 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 OLIG3Q7RTU3 272 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 B3GNT8Q7Z7M8 397 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 RBM45Q8IUH3 476 aaKnown RBP12.4□□□□□ -0.42
CPNE1-225ENST00000483495 ZNF675Q8TD23 568 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 ADAMTS15Q8TE58 950 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 CNDP2Q96KP4 475 aaKnown RBP12.4□□□□□ -0.42
CPNE1-225ENST00000483495 ZNF556Q9HAH1 456 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 RHCGQ9UBD6 479 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 RSL24D1Q9UHA3 163 aaKnown RBP12.4□□□□□ -0.42
CPNE1-225ENST00000483495 ENOPH1Q9UHY7 261 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 A4GNTQ9UNA3 340 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 SIT1Q9Y3P8 196 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 SCN3AQ9NY46 2000 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 TRBV4-1A0A0J9YWV2 114 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 H1F0P07305 194 aaKnown RBP12.4□□□□□ -0.42
CPNE1-225ENST00000483495 ELAVL4P26378 380 aaKnown RBP12.4□□□□□ -0.42
CPNE1-225ENST00000483495 GGT2P36268 569 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 CHRNEQ04844 493 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 RAB39AQ14964 217 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 DEFB133Q30KQ1 61 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 LAIR1Q6GTX8 287 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 NIPAL1Q6NVV3 410 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 MAMSTRQ6ZN01 415 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 DEF8Q6ZN54 512 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 SPARTQ8N0X7 666 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 TAGAPQ8N103 731 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 SHISA5Q8N114 240 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 SLC16A11Q8NCK7 471 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 VANGL1Q8TAA9 524 aaPredicted RBP12.4□□□□□ -0.42
CPNE1-225ENST00000483495 SGCDQ92629 289 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 ANKRD9Q96BM1 317 aaPredicted RBP12.4□□□□□ -0.42
CPNE1-225ENST00000483495 NMD3Q96D46 503 aaKnown RBP12.4□□□□□ -0.42
CPNE1-225ENST00000483495 DUSP21Q9H596 190 aa12.4□□□□□ -0.42
CPNE1-225ENST00000483495 PAK1IP1Q9NWT1 392 aaPredicted RBP12.4□□□□□ -0.42
CPNE1-225ENST00000483495 TDRD6O60522 2096 aaKnown RBP12.39□□□□□ -0.43
CPNE1-225ENST00000483495 A0A1W2PRQ8 180 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 TLCD2A6NGC4 264 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 CCDC160A6NGH7 325 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 FAM227AF5H4B4 570 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 M0R3H8 397 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 STK25O00506 426 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 FAAHO00519 579 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 BCAT2O15382 392 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-225ENST00000483495 CHST10O43529 356 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 PCDHGA12O60330 932 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 LDB3O75112 727 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 RDH16O75452 317 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 ZIC2O95409 532 aaPredicted RBP12.39□□□□□ -0.43
CPNE1-225ENST00000483495 ADAP00813 363 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 GASTP01350 101 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 DCNP07585 359 aaKnown RBP12.39□□□□□ -0.43
CPNE1-225ENST00000483495 AFF3P51826 1226 aaKnown RBP12.39□□□□□ -0.43
CPNE1-225ENST00000483495 MAPK10P53779 464 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 SKP1P63208 163 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 MGAT2Q10469 447 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 DGCR6Q14129 220 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 FAM53BQ14153 422 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 NDUFA9Q16795 377 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 PRICKLE4Q2TBC4 344 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 ARHGAP11BQ3KRB8 267 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 TRMT12Q53H54 448 aaKnown RBP12.39□□□□□ -0.43
CPNE1-225ENST00000483495 WDR45BQ5MNZ6 344 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 ZCCHC12Q6PEW1 402 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 DHRS4L2Q6PKH6 230 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 B3GNT6Q6ZMB0 384 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 FAM92BQ6ZTR7 304 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 C16orf62Q7Z3J2 963 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 ENTHD1Q8IYW4 607 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 AQP11Q8NBQ7 271 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 BPIFB6Q8NFQ5 453 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 OR9A4Q8NGU2 314 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 CTHRC1Q96CG8 243 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 ERVMER34-1Q9H9K5 563 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 VCX3AQ9NNX9 186 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 UCKL1Q9NWZ5 548 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 TMCC3Q9ULS5 477 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 PCDHGB1Q9Y5G3 927 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 TMEM131Q92545 1883 aa12.39□□□□□ -0.43
CPNE1-225ENST00000483495 FOXS1O43638 330 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 MRPS14O60783 128 aaKnown RBP12.38□□□□□ -0.43
CPNE1-225ENST00000483495 WBP4O75554 376 aaKnown RBP12.38□□□□□ -0.43
CPNE1-225ENST00000483495 ALPPP05187 535 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 HOXA6P31267 233 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 PRKAR1BP31321 381 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 C21orf59P57076 290 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 CSNK2BP67870 215 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 SLC35A2P78381 396 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 ID2Q02363 134 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 TEKQ02763 1124 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 SEC23BQ15437 767 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 INAVAQ3KP66 663 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 DCST1Q5T197 706 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 GARNL3Q5VVW2 1013 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 FRRS1Q6ZNA5 592 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 GALNT15Q8N3T1 639 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 SIMC1Q8NDZ2 872 aa12.38□□□□□ -0.43
CPNE1-225ENST00000483495 OR6T1Q8NGN1 323 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms