RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 RIPPLY2Q5TAB7 128 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 HIST2H2AA3Q6FI13 130 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 CTAGE6Q86UF2 777 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 BCL6BQ8N143 479 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-207ENST00000483407 PDIK1LQ8N165 341 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 TCAIMQ8N3R3 496 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 STPG3Q8N7X2 389 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 LINC00482Q8N8I6 264 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 GLB1L3Q8NCI6 653 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-207ENST00000483407 ZBTB34Q8NCN2 500 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 SRFBP1Q8NEF9 429 aaKnown RBP5.41□□□□□ -1.54
CSDE1-207ENST00000483407 OR5AN1Q8NGI8 311 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 SLC22A8Q8TCC7 542 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 SLC2A12Q8TD20 617 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 PTPMT1Q8WUK0 201 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-207ENST00000483407 NRGNQ92686 78 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 LRRC39Q96DD0 335 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 CFAP36Q96G28 342 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 MS4A14Q96JA4 679 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 VPS39Q96JC1 886 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 RUNDC3BQ96NL0 473 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 KCNC2Q96PR1 638 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 ALOXE3Q9BYJ1 711 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 EHD1Q9H4M9 534 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 NT5DC2Q9H857 520 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 CNOT10Q9H9A5 744 aaKnown RBP5.41□□□□□ -1.54
CSDE1-207ENST00000483407 LYRM4Q9HD34 91 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 GPRC5BQ9NZH0 403 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 SLC17A6Q9P2U8 582 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 CTNNAL1Q9UBT7 734 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 Q9UFV3 132 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 ST6GALNAC2Q9UJ37 374 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 BOKQ9UMX3 212 aaPredicted RBP5.41□□□□□ -1.54
CSDE1-207ENST00000483407 JRKLQ9Y4A0 524 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 OARD1Q9Y530 152 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 PCDHGB3Q9Y5G1 929 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 CLDN16Q9Y5I7 305 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 FAM215AQ9Y5M1 114 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 LIPGQ9Y5X9 500 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 CACNA1CQ13936 2221 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 DCHS2Q6V1P9 2916 aa5.41□□□□□ -1.54
CSDE1-207ENST00000483407 A0A1B0GTL3 188 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 CCDC154A6NI56 674 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 BANF1O75531 89 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 TUSC2O75896 110 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 CCL3P10147 92 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 UQCRC1P31930 480 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 ELK3P41970 407 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 GDF5P43026 501 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 SLC6A12P48065 614 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 DNASE1L1P49184 302 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 NR0B1P51843 470 aaKnown RBP5.4□□□□□ -1.54
CSDE1-207ENST00000483407 PGGT1BP53609 377 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 SLC12A2P55011 1212 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 DLX5P56178 289 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 NRG3P56975 720 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 KCNJ2P63252 427 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 MGAT5Q09328 741 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 FOXO1Q12778 655 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 BIKQ13323 160 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 MORF4L2Q15014 288 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 SF3B4Q15427 424 aaKnown RBP eCLIP5.4□□□□□ -1.54
CSDE1-207ENST00000483407 TGFBIQ15582 683 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 MPEG1Q2M385 716 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 ADPRMQ3LIE5 342 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 SLC22A10Q63ZE4 541 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 TMEM200BQ69YZ2 307 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 RTL6Q6ICC9 239 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 TRMT10BQ6PF06 316 aaKnown RBP5.4□□□□□ -1.54
CSDE1-207ENST00000483407 OVCH2Q7RTZ1 564 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 CAMKMTQ7Z624 323 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 GAS2L3Q86XJ1 694 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 LIX1LQ8IVB5 337 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 GLB1L2Q8IW92 636 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 DND1Q8IYX4 353 aaKnown RBP5.4□□□□□ -1.54
CSDE1-207ENST00000483407 FBXW8Q8N3Y1 598 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 LIX1Q8N485 282 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 SLC15A4Q8N697 577 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 NUBPLQ8TB37 319 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 ACTRT1Q8TDG2 376 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 FAM222BQ8WU58 562 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 NRG4Q8WWG1 115 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 RHBDF1Q96CC6 855 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 PTCD3Q96EY7 689 aaKnown RBP5.4□□□□□ -1.54
CSDE1-207ENST00000483407 RBM18Q96H35 190 aaKnown RBP5.4□□□□□ -1.54
CSDE1-207ENST00000483407 ART5Q96L15 291 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 PWWP2AQ96N64 755 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 QRFPRQ96P65 431 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 DGAT2Q96PD7 388 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 CSF3RQ99062 836 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 GPATCH1Q9BRR8 931 aaKnown RBP5.4□□□□□ -1.54
CSDE1-207ENST00000483407 TBCDQ9BTW9 1192 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 EFCAB11Q9BUY7 163 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 AICDAQ9GZX7 198 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 POPDC3Q9HBV1 291 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 RASSF1Q9NS23 344 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 DNAJC11Q9NVH1 559 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.4□□□□□ -1.54
CSDE1-207ENST00000483407 QPCTLQ9NXS2 382 aa5.4□□□□□ -1.54
CSDE1-207ENST00000483407 NSMCE4AQ9NXX6 385 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms