RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 HPS6Q86YV9 775 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 CDRT4Q8N9R6 151 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 HSPBAP1Q96EW2 488 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 AGAP4Q96P64 663 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 TRIM4Q9C037 500 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 EFCAB1Q9HAE3 211 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 ARMCX1Q9P291 453 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 MYOTQ9UBF9 498 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 ZNF223Q9UK11 482 aaPredicted RBP14.24□□□□□ -0.13
CCM2-215ENST00000482714 GPR55Q9Y2T6 319 aaPredicted RBP14.24□□□□□ -0.13
CCM2-215ENST00000482714 YARS2Q9Y2Z4 477 aaKnown RBP14.24□□□□□ -0.13
CCM2-215ENST00000482714 PCDHGB3Q9Y5G1 929 aa14.24□□□□□ -0.13
CCM2-215ENST00000482714 HEMK1Q9Y5R4 338 aaPredicted RBP14.24□□□□□ -0.13
CCM2-215ENST00000482714 MED13Q9UHV7 2174 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 ACOX3O15254 700 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 AGR2O95994 175 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 ALPPP05187 535 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 ABCB1P08183 1280 aaPredicted RBP14.23□□□□□ -0.13
CCM2-215ENST00000482714 ITGAMP11215 1152 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 COX4I1P13073 169 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 NAGAP17050 411 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 ANXA11P50995 505 aaKnown RBP14.23□□□□□ -0.13
CCM2-215ENST00000482714 RHDQ02161 417 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 EBPQ15125 230 aaKnown RBP14.23□□□□□ -0.13
CCM2-215ENST00000482714 ZNHIT3Q15649 155 aaPredicted RBP14.23□□□□□ -0.13
CCM2-215ENST00000482714 TBR1Q16650 682 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 PAGE3Q5JUK9 113 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 C6orf10Q5SRN2 563 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 GK5Q6ZS86 529 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 C6orf120Q7Z4R8 191 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 FITM2Q8N6M3 262 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 ZNF321PQ8N8H1 164 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 ADIPOR1Q96A54 375 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 NEURL3Q96EH8 262 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 LCORQ96JN0 433 aaPredicted RBP14.23□□□□□ -0.13
CCM2-215ENST00000482714 MS4A4EQ96PG1 132 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 LMF2Q9BU23 707 aaKnown RBP14.23□□□□□ -0.13
CCM2-215ENST00000482714 GID8Q9NWU2 228 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 STMN3Q9NZ72 180 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 ABI3Q9P2A4 366 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 MAP10Q9P2G4 905 aa14.23□□□□□ -0.13
CCM2-215ENST00000482714 FAF1Q9UNN5 650 aaPredicted RBP14.23□□□□□ -0.13
CCM2-215ENST00000482714 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 A8MUI8 341 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 TO15178 435 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 EFNA1P20827 205 aaPredicted RBP14.22□□□□□ -0.13
CCM2-215ENST00000482714 PTPN6P29350 595 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 MAP3K8P41279 467 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 PRKAG1P54619 331 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 MLF1P58340 268 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 EXOSC7Q15024 291 aaKnown RBP14.22□□□□□ -0.13
CCM2-215ENST00000482714 PIGGQ5H8A4 983 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 SLC2A7Q6PXP3 512 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 ISLR2Q6UXK2 745 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 C9orf40Q8IXQ3 194 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 DND1Q8IYX4 353 aaKnown RBP14.22□□□□□ -0.13
CCM2-215ENST00000482714 TAGAPQ8N103 731 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 ZNF441Q8N8Z8 693 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 MIPOL1Q8TD10 442 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 BRIX1Q8TDN6 353 aaKnown RBP14.22□□□□□ -0.13
CCM2-215ENST00000482714 ZFP90Q8TF47 636 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 ROPN1LQ96C74 230 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 GIMAP5Q96F15 307 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 VSTM2LQ96N03 204 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 BTBD9Q96Q07 612 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 STACQ99469 402 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 SMAD5Q99717 465 aaKnown RBP14.22□□□□□ -0.13
CCM2-215ENST00000482714 SH3GL1Q99961 368 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 INPP5KQ9BT40 448 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 ACTRT3Q9BYD9 372 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 WWTR1Q9GZV5 400 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 PAIP1Q9H074 479 aaKnown RBP14.22□□□□□ -0.13
CCM2-215ENST00000482714 ADNPQ9H2P0 1102 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 RAD21L1Q9H4I0 556 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 EPS8L2Q9H6S3 715 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 ZNF552Q9H707 407 aaPredicted RBP14.22□□□□□ -0.13
CCM2-215ENST00000482714 GPR83Q9NYM4 423 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 TUBD1Q9UJT1 453 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 PCDHB14Q9Y5E9 798 aa14.22□□□□□ -0.13
CCM2-215ENST00000482714 RNF103-CHMP3A0A140T963 221 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 ASPDHA6ND91 283 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 TMEM200CA6NKL6 621 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 MKRN2OSH3BPM6 223 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 DNAJB5O75953 348 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 HMGN2P05204 90 aaKnown RBP14.21□□□□□ -0.13
CCM2-215ENST00000482714 SOX11P35716 441 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 NRG3P56975 720 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 DUSP8Q13202 625 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 CYP27C1Q4G0S4 372 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 ACER2Q5QJU3 275 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 EXOSC6Q5RKV6 272 aaKnown RBP14.21□□□□□ -0.13
CCM2-215ENST00000482714 ABHD17BQ5VST6 288 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 SAXO2Q658L1 398 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 MFSD12Q6NUT3 480 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 CDC73Q6P1J9 531 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 IGFL2Q6UWQ7 119 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 DLEU7Q6UYE1 221 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 TRPM8Q7Z2W7 1104 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 SNX32Q86XE0 403 aa14.21□□□□□ -0.13
CCM2-215ENST00000482714 TREML1Q86YW5 311 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms