RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 GOLGA8NF8WBI6 632 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 IFI6P09912 130 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 LAMP1P11279 417 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 FRKP42685 505 aaPredicted RBP19.3■□□□□ 0.68
SEC13-217ENST00000482647 PPICP45877 212 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 LYPD8Q6UX82 237 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.3■□□□□ 0.68
SEC13-217ENST00000482647 OR2L13Q8N349 312 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 GALNT11Q8NCW6 608 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 PSD4Q8NDX1 1056 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 HSPBAP1Q96EW2 488 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 DPY30Q9C005 99 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 SLCO1B3Q9NPD5 702 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 MED4Q9NPJ6 270 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 OLAHQ9NV23 265 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 GPR55Q9Y2T6 319 aaPredicted RBP19.3■□□□□ 0.68
SEC13-217ENST00000482647 NPFFR2Q9Y5X5 522 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 USH1CQ9Y6N9 552 aa19.3■□□□□ 0.68
SEC13-217ENST00000482647 UPK1AO00322 258 aa19.29■□□□□ 0.68
SEC13-217ENST00000482647 ACOX3O15254 700 aa19.29■□□□□ 0.68
SEC13-217ENST00000482647 PEX1O43933 1283 aa19.29■□□□□ 0.68
SEC13-217ENST00000482647 TMED10P49755 219 aaKnown RBP19.29■□□□□ 0.68
SEC13-217ENST00000482647 PSPHP78330 225 aa19.29■□□□□ 0.68
SEC13-217ENST00000482647 MLC1Q15049 377 aa19.29■□□□□ 0.68
SEC13-217ENST00000482647 NXNQ6DKJ4 435 aa19.29■□□□□ 0.68
SEC13-217ENST00000482647 SULF2Q8IWU5 870 aa19.29■□□□□ 0.68
SEC13-217ENST00000482647 ARFGAP2Q8N6H7 521 aa19.29■□□□□ 0.68
SEC13-217ENST00000482647 ACTRT2Q8TDY3 377 aa19.29■□□□□ 0.68
SEC13-217ENST00000482647 MAGED4Q96JG8 741 aa19.29■□□□□ 0.68
SEC13-217ENST00000482647 BHLHE41Q9C0J9 482 aaPredicted RBP19.29■□□□□ 0.68
SEC13-217ENST00000482647 NXF5Q9H1B4 397 aaKnown RBP19.29■□□□□ 0.68
SEC13-217ENST00000482647 NBASA2RRP1 2371 aa19.29■□□□□ 0.68
SEC13-217ENST00000482647 HELZ2Q9BYK8 2649 aaKnown RBP19.29■□□□□ 0.68
SEC13-217ENST00000482647 RP1L1Q8IWN7 2480 aaPredicted RBP19.28■□□□□ 0.68
SEC13-217ENST00000482647 A0A1W2PRB8 838 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 ASPDHA6ND91 283 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 FRG2CA6NGY1 282 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 PYCARD-AS1I3L0S3 204 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 ZNF195O14628 629 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 TP53I11O14683 189 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 WISP1O95388 367 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 TGDSO95455 350 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 P04436 131 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 NAGAP17050 411 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 PGS1Q32NB8 556 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 SLC9B1Q4ZJI4 515 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 SLC22A10Q63ZE4 541 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 TMEM64Q6YI46 380 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 RGS9BPQ6ZS82 235 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 MAVSQ7Z434 540 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 POGLUT1Q8NBL1 392 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 FAM13CQ8NE31 585 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 MAELQ96JY0 434 aaKnown RBP19.28■□□□□ 0.68
SEC13-217ENST00000482647 VSTM2LQ96N03 204 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 BTBD9Q96Q07 612 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 DUSP26Q9BV47 211 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 FOLH1BQ9HBA9 442 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 SACM1LQ9NTJ5 587 aa19.28■□□□□ 0.68
SEC13-217ENST00000482647 CROCCQ5TZA2 2017 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 TCP11X1B4DZS4 312 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 TO15178 435 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 DIAPH2O60879 1101 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 ERN1O75460 977 aaKnown RBP19.27■□□□□ 0.68
SEC13-217ENST00000482647 CNR1P21554 472 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 ABCD3P28288 659 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 CLNS1AP54105 237 aaKnown RBP19.27■□□□□ 0.68
SEC13-217ENST00000482647 PMP22Q01453 160 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 SRSF11Q05519 484 aaKnown RBP19.27■□□□□ 0.68
SEC13-217ENST00000482647 NNATQ16517 81 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 NTRK2Q16620 822 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 LSM12Q3MHD2 195 aaKnown RBP19.27■□□□□ 0.68
SEC13-217ENST00000482647 ZNF324BQ6AW86 544 aaPredicted RBP19.27■□□□□ 0.68
SEC13-217ENST00000482647 EPGNQ6UW88 154 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 CAMKMTQ7Z624 323 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 OR10G3Q8NGC4 313 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 CEP70Q8NHQ1 597 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 NUDT8Q8WV74 236 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 OR5P2Q8WZ92 322 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 NR4A3Q92570 626 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 C3orf14Q9HBI5 128 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 SH2D2AQ9NP31 389 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 AIG1Q9NVV5 245 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 CNIH4Q9P003 139 aa19.27■□□□□ 0.68
SEC13-217ENST00000482647 PSMG1O95456 288 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 ALDOCP09972 364 aaKnown RBP19.26■□□□□ 0.67
SEC13-217ENST00000482647 CT45A8P0DMV1 189 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 CT45A9P0DMV2 189 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 EDN3P14138 238 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 EFNA1P20827 205 aaPredicted RBP19.26■□□□□ 0.67
SEC13-217ENST00000482647 MEOX1P50221 254 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 CDK9P50750 372 aaKnown RBP19.26■□□□□ 0.67
SEC13-217ENST00000482647 GPR85P60893 370 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 ALDH6A1Q02252 535 aaKnown RBP19.26■□□□□ 0.67
SEC13-217ENST00000482647 PLCXD2Q0VAA5 305 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 ZNF155Q12901 538 aaPredicted RBP19.26■□□□□ 0.67
SEC13-217ENST00000482647 RPS6KA2Q15349 733 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 CT45A2Q5DJT8 189 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 FAM47EQ6ZV65 393 aa19.26■□□□□ 0.67
SEC13-217ENST00000482647 CPSF7Q8N684 471 aaKnown RBP19.26■□□□□ 0.67
SEC13-217ENST00000482647 OR5M3Q8NGP4 307 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms