RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 MLF1P58340 268 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 RPS13P62277 151 aaKnown RBP3.8□□□□□ -1.8
VPS41-212ENST00000482217 S100A12P80511 92 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 CDK16Q00536 496 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 MYBPC1Q00872 1141 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 POM121L1PQ3SYA9 428 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 FAM174BQ3ZCQ3 159 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 KIAA1755Q5JYT7 1200 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 C6orf10Q5SRN2 563 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 C20orf194Q5TEA3 1177 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 BSPRYQ5W0U4 402 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 NCAPH2Q6IBW4 605 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 OR2A2Q6IF42 318 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 ZNF517Q6ZMY9 492 aaPredicted RBP3.8□□□□□ -1.8
VPS41-212ENST00000482217 DEF8Q6ZN54 512 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 Q6ZPB1 254 aaPredicted RBP3.8□□□□□ -1.8
VPS41-212ENST00000482217 FAM57BQ71RH2 274 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 UTS2BQ765I0 119 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 SLC16A9Q7RTY1 509 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 MEX3DQ86XN8 651 aaKnown RBP3.8□□□□□ -1.8
VPS41-212ENST00000482217 PALB2Q86YC2 1186 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 TMC8Q8IU68 726 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 SLC35F3Q8IY50 421 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 BOD1L2Q8IYS8 172 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 SLC38A6Q8IZM9 456 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 CLEC4FQ8N1N0 589 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 ALLCQ8N6M5 410 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 SDR9C7Q8NEX9 313 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 OR5T3Q8NGG3 340 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 DTD1Q8TEA8 209 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 ZNF473Q8WTR7 871 aaKnown RBP3.8□□□□□ -1.8
VPS41-212ENST00000482217 GGHQ92820 318 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 P2RX5Q93086 422 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 COQ8BQ96D53 544 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 FRG2BQ96QU4 278 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 KRT12Q99456 494 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 NDNQ99608 321 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 HSD17B14Q9BPX1 270 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 TMEM47Q9BQJ4 181 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 C7orf50Q9BRJ6 194 aaKnown RBP3.8□□□□□ -1.8
VPS41-212ENST00000482217 MCRIP2Q9BUT9 160 aaKnown RBP3.8□□□□□ -1.8
VPS41-212ENST00000482217 C20orf24Q9BUV8 137 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 TM6SF2Q9BZW4 377 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 CATSPERBQ9H7T0 1116 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 DCLRE1BQ9H816 532 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 MTHFD2LQ9H903 347 aaPredicted RBP3.8□□□□□ -1.8
VPS41-212ENST00000482217 MOV10Q9HCE1 1003 aaKnown RBP3.8□□□□□ -1.8
VPS41-212ENST00000482217 Q9N2J8 555 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 BPIFA1Q9NP55 256 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 ENTPD7Q9NQZ7 604 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 SMOXQ9NWM0 555 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 DPP3Q9NY33 737 aa3.8□□□□□ -1.8
VPS41-212ENST00000482217 STOX2Q9P2F5 926 aaPredicted RBP3.8□□□□□ -1.8
VPS41-212ENST00000482217 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.8□□□□□ -1.8
VPS41-212ENST00000482217 ZMYM6O95789 1325 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 FRMPD4Q14CM0 1322 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 CDHR2Q9BYE9 1310 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 MAPK8IP3Q9UPT6 1336 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 SMIM35A0A1B0GVV1 85 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 TCRBV7S3A2A0A539 114 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 TYW5A2RUC4 315 aaKnown RBP3.79□□□□□ -1.8
VPS41-212ENST00000482217 RNF222A6NCQ9 220 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 TMEM8BA6NDV4 472 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 SMCO2A6NFE2 343 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 ANKUB1A6NFN9 424 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 HHLA1C9JL84 531 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 F8VP50 259 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 M0QZ24 198 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 TOX3O15405 576 aaPredicted RBP3.79□□□□□ -1.8
VPS41-212ENST00000482217 ZSCAN12O43309 604 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 MSI1O43347 362 aaKnown RBP3.79□□□□□ -1.8
VPS41-212ENST00000482217 NME2P1O60361 137 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 LRCH4O75427 683 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 RPP14O95059 124 aaKnown RBP3.79□□□□□ -1.8
VPS41-212ENST00000482217 CLDN7O95471 211 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 NFATC1O95644 943 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 GSRP00390 522 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 IFNA6P05013 189 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 SERPINE2P07093 398 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 MMP3P08254 477 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 TRIM49P0CI25 452 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 TRIM49CP0CI26 452 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 CALM1P0DP23 149 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 CALM2P0DP24 149 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 CALM3P0DP25 149 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 COX5BP10606 129 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 CTSAP10619 480 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 PSKH1P11801 424 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 ETS2P15036 469 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 FOSL2P15408 326 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 AMD1P17707 334 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 ATF6P18850 670 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 TEAD1P28347 426 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 P2RY2P41231 377 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 ACTR1BP42025 376 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 ART1P52961 327 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 RAD23BP54727 409 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 CDH4P55283 916 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 NUP107P57740 925 aa3.79□□□□□ -1.8
VPS41-212ENST00000482217 HERV-K104P63124 156 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms