RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ADORA2A-AS1P86434 159 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 PLCXD2Q0VAA5 305 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 SLC10A1Q14973 349 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 KIAA0040Q15053 153 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 FAM71E1Q6IPT2 247 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 C3P1Q6ZMU1 363 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 TICAM1Q8IUC6 712 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 PRR22Q8IZ63 422 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 SIMC1Q8NDZ2 872 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 SPPL2AQ8TCT8 520 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 ZNF597Q96LX8 424 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 JSRP1Q96MG2 331 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-213ENST00000482192 BBS4Q96RK4 519 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 CCT7Q99832 543 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 STMN4Q9H169 189 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-213ENST00000482192 TP63Q9H3D4 680 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-213ENST00000482192 LRTM1Q9HBL6 345 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 TAS2R7Q9NYW3 318 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 KLF2Q9Y5W3 355 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-213ENST00000482192 PTGDR2Q9Y5Y4 395 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 PRRC2CQ9Y520 2896 aaKnown RBP10.92□□□□□ -0.66
HMGN1-213ENST00000482192 CROCCQ5TZA2 2017 aa10.92□□□□□ -0.66
HMGN1-213ENST00000482192 A0A1B0GVC2 190 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 FRG2CA6NGY1 282 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 MYO1GB0I1T2 1018 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 PRSS44E7EML9 344 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 AQP7O14520 342 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 ADAM10O14672 748 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 BCKDKO14874 412 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 RGS16O15492 202 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-213ENST00000482192 SUSD5O60279 629 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 PLOD3O60568 738 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 TRIM3O75382 744 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-213ENST00000482192 LRATO95237 230 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 ABCB1P08183 1280 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-213ENST00000482192 CELA3AP09093 270 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 LINC00032P0C843 101 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 CREB1P16220 341 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 NTSP30990 170 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 NCBP2P52298 156 aaKnown RBP eCLIP10.91□□□□□ -0.66
HMGN1-213ENST00000482192 SH2D4BQ5SQS7 431 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 TMEM198Q66K66 360 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 Q6ZSR9 355 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 TRILQ7L0X0 811 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 NUP54Q7Z3B4 507 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 CROCCP2Q86T23 111 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 PACS2Q86VP3 889 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 DDIASQ8IXT1 998 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 CLYBLQ8N0X4 340 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 SLC34A3Q8N130 599 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 OR2T11Q8NH01 316 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 TWIST2Q8WVJ9 160 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 KAT2AQ92830 837 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 OMA1Q96E52 524 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 RILPQ96NA2 401 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 BTBD9Q96Q07 612 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 DMRTA2Q96SC8 542 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 ANGPTL4Q9BY76 406 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 TUBB1Q9H4B7 451 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 EXO5Q9H790 373 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 PROK2Q9HC23 129 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 SSU72Q9NP77 194 aaKnown RBP10.91□□□□□ -0.66
HMGN1-213ENST00000482192 QPCTLQ9NXS2 382 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 GPR55Q9Y2T6 319 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-213ENST00000482192 TMED5Q9Y3A6 229 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 TRAF6Q9Y4K3 522 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 LIPGQ9Y5X9 500 aa10.91□□□□□ -0.66
HMGN1-213ENST00000482192 A0A087WV62 115 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 TRGV5A0A0B4J1U4 118 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 TMEM233B4DJY2 109 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 NPIPA2E9PIF3 369 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 NPIPA3F8WFD2 350 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 LSM1O15116 133 aaKnown RBP10.9□□□□□ -0.66
HMGN1-213ENST00000482192 TO15178 435 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 CTIFO43310 598 aaKnown RBP10.9□□□□□ -0.66
HMGN1-213ENST00000482192 HCN1O60741 890 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 COQ9O75208 318 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 ERN1O75460 977 aaKnown RBP10.9□□□□□ -0.66
HMGN1-213ENST00000482192 JUNP05412 331 aaKnown RBP10.9□□□□□ -0.66
HMGN1-213ENST00000482192 BPGMP07738 259 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 RFPL3SP0C7P2 107 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 TACR1P25103 407 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 CASP3P42574 277 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 ETV4P43268 484 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 MASP1P48740 699 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 MAN2A2P49641 1150 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 RPL38P63173 70 aaKnown RBP10.9□□□□□ -0.66
HMGN1-213ENST00000482192 UGT3A2Q3SY77 523 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 RFTN2Q52LD8 501 aaPredicted RBP10.9□□□□□ -0.66
HMGN1-213ENST00000482192 ZNF787Q6DD87 383 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 TMEM81Q6P7N7 255 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 ZCCHC23Q6ZST2 131 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 OR7G2Q8NG99 324 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 AGR3Q8TD06 166 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 SARAFQ96BY9 339 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 ZNF764Q96H86 408 aaPredicted RBP10.9□□□□□ -0.66
HMGN1-213ENST00000482192 EGLN2Q96KS0 407 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 FCRL1Q96LA6 429 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 VSTM2LQ96N03 204 aa10.9□□□□□ -0.66
HMGN1-213ENST00000482192 LDAHQ9H6V9 325 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms