RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 JPT2Q9H910 190 aa3.12□□□□□ -1.91
CBX3-207ENST00000481300 DDX28Q9NUL7 540 aaKnown RBP3.12□□□□□ -1.91
CBX3-207ENST00000481300 CYP39A1Q9NYL5 469 aa3.12□□□□□ -1.91
CBX3-207ENST00000481300 THYN1Q9P016 225 aa3.12□□□□□ -1.91
CBX3-207ENST00000481300 PAK5Q9P286 719 aa3.12□□□□□ -1.91
CBX3-207ENST00000481300 MGAT4AQ9UM21 535 aa3.12□□□□□ -1.91
CBX3-207ENST00000481300 ADAMTS7Q9UKP4 1686 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 PKD1L3Q7Z443 1732 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 NRAPQ86VF7 1730 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 VEGFDO43915 354 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 SERPINF2P08697 491 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 ABHD2P08910 425 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 KRT5P13647 590 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 MX1P20591 662 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 MARCKSP29966 332 aaPredicted RBP3.11□□□□□ -1.91
CBX3-207ENST00000481300 ATP4BP51164 291 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 RPL27P61353 136 aaKnown RBP3.11□□□□□ -1.91
CBX3-207ENST00000481300 HERV-K104P63124 156 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 CDKL1Q00532 357 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 CD300CQ08708 224 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 HFEQ30201 348 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 SNAI3Q3KNW1 292 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 TEX35Q5T0J7 233 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 FAM182AQ5T1J6 154 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 PRR5LQ6MZQ0 368 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 ZNF343Q6P1L6 599 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 ABHD12Q8N2K0 398 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 Q8N377 158 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 PARP8Q8N3A8 854 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 LEMD2Q8NC56 503 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 OR1B1Q8NGR6 318 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 RUNDC3BQ96NL0 473 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 RCHY1Q96PM5 261 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 ATP6V0BQ99437 205 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 RBM24Q9BX46 236 aaKnown RBP3.11□□□□□ -1.91
CBX3-207ENST00000481300 PUS3Q9BZE2 481 aaKnown RBP3.11□□□□□ -1.91
CBX3-207ENST00000481300 DDX47Q9H0S4 455 aaKnown RBP3.11□□□□□ -1.91
CBX3-207ENST00000481300 TRPV6Q9H1D0 765 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 DBNDD1Q9H9R9 158 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 PIGVQ9NUD9 493 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 TECRQ9NZ01 308 aaKnown RBP3.11□□□□□ -1.91
CBX3-207ENST00000481300 EIF3KQ9UBQ5 218 aaKnown RBP3.11□□□□□ -1.91
CBX3-207ENST00000481300 MOSPD1Q9UJG1 213 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 KLK13Q9UKR3 277 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 MRPS2Q9Y399 296 aaKnown RBP3.11□□□□□ -1.91
CBX3-207ENST00000481300 CARMIL3Q8ND23 1372 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 PLCH1Q4KWH8 1693 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 THSD7AQ9UPZ6 1657 aa3.11□□□□□ -1.91
CBX3-207ENST00000481300 PARP4Q9UKK3 1724 aaKnown RBP3.1□□□□□ -1.91
CBX3-207ENST00000481300 NWD2Q9ULI1 1742 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 TRBV5-4A0A0C4DH59 114 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 TRBV2A0A0J9YWF9 115 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 BCLAF3A2AJT9 711 aaKnown RBP3.1□□□□□ -1.91
CBX3-207ENST00000481300 YJEFN3A6XGL0 299 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 TLR4O00206 839 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 CHEK1O14757 476 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 DUSP11O75319 330 aaKnown RBP3.1□□□□□ -1.91
CBX3-207ENST00000481300 TXNDC12O95881 172 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 IGHV3-13P01766 116 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 FHP07954 510 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 LMO2P25791 158 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 SPRP35270 261 aaPredicted RBP3.1□□□□□ -1.91
CBX3-207ENST00000481300 SLC1A4P43007 532 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 TIMM10P62072 90 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 RPS8P62241 208 aaKnown RBP3.1□□□□□ -1.91
CBX3-207ENST00000481300 GSTO1P78417 241 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 CCZ1BP86790 482 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 CCZ1P86791 482 aaPredicted RBP3.1□□□□□ -1.91
CBX3-207ENST00000481300 RIGQ13278 110 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 SLC17A1Q14916 467 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 P2RY14Q15391 338 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 SIX1Q15475 284 aaPredicted RBP3.1□□□□□ -1.91
CBX3-207ENST00000481300 DCAF12Q5T6F0 453 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 CASC1Q6TDU7 716 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 ZNF841Q6ZN19 808 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 WDR49Q8IV35 697 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 PHC2Q8IXK0 858 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 RTL3Q8N8U3 475 aaKnown RBP3.1□□□□□ -1.91
CBX3-207ENST00000481300 SSC4DQ8WTU2 575 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 NABP1Q96AH0 204 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 MRPL53Q96EL3 112 aaKnown RBP3.1□□□□□ -1.91
CBX3-207ENST00000481300 DTD2Q96FN9 168 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 C16orf58Q96GQ5 468 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 CDHR1Q96JP9 859 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 SOSTQ9BQB4 213 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 TRIM6Q9C030 488 aaPredicted RBP3.1□□□□□ -1.91
CBX3-207ENST00000481300 LIME1Q9H400 295 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 VPS54Q9P1Q0 977 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 ERVK-18Q9QC07 812 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 TRMT6Q9UJA5 497 aaKnown RBP3.1□□□□□ -1.91
CBX3-207ENST00000481300 APPL1Q9UKG1 709 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 TSPAN16Q9UKR8 245 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 RARRES3Q9UL19 164 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 MROH5Q6ZUA9 1318 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 RTL9Q8NET4 1388 aa3.1□□□□□ -1.91
CBX3-207ENST00000481300 A0A1B0GUL7 405 aa3.09□□□□□ -1.91
CBX3-207ENST00000481300 SH3PXD2BA1X283 911 aa3.09□□□□□ -1.91
CBX3-207ENST00000481300 MACROD2A1Z1Q3 448 aa3.09□□□□□ -1.91
CBX3-207ENST00000481300 ACOD1A6NK06 481 aa3.09□□□□□ -1.91
CBX3-207ENST00000481300 ZNF724A8MTY0 619 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms