RNA–Protein interactions for RNA: ENST00000481121.5

NELFE-208, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-208ENST00000481121 RPL14P50914 215 aaKnown RBP19.16■□□□□ 0.66
NELFE-208ENST00000481121 DCAF7P61962 342 aa19.16■□□□□ 0.66
NELFE-208ENST00000481121 PLGLB1Q02325 96 aa19.16■□□□□ 0.66
NELFE-208ENST00000481121 C6orf136Q5SQH8 315 aa19.16■□□□□ 0.66
NELFE-208ENST00000481121 AGBL2Q5U5Z8 902 aa19.16■□□□□ 0.66
NELFE-208ENST00000481121 ANKRD26P1Q6NSI1 321 aa19.16■□□□□ 0.66
NELFE-208ENST00000481121 TMEM64Q6YI46 380 aa19.16■□□□□ 0.66
NELFE-208ENST00000481121 PRR22Q8IZ63 422 aa19.16■□□□□ 0.66
NELFE-208ENST00000481121 LIX1Q8N485 282 aa19.16■□□□□ 0.66
NELFE-208ENST00000481121 OR7G2Q8NG99 324 aa19.16■□□□□ 0.66
NELFE-208ENST00000481121 OR5M3Q8NGP4 307 aa19.16■□□□□ 0.66
NELFE-208ENST00000481121 LCORQ96JN0 433 aaPredicted RBP19.16■□□□□ 0.66
NELFE-208ENST00000481121 GLIPR2Q9H4G4 154 aa19.16■□□□□ 0.66
NELFE-208ENST00000481121 SLC5A6Q9Y289 635 aa19.16■□□□□ 0.66
NELFE-208ENST00000481121 SETXQ7Z333 2677 aaKnown RBP19.16■□□□□ 0.66
NELFE-208ENST00000481121 SPTAN1Q13813 2472 aaKnown RBP19.16■□□□□ 0.66
NELFE-208ENST00000481121 HECTD1Q9ULT8 2610 aa19.16■□□□□ 0.66
NELFE-208ENST00000481121 HS6ST1O60243 411 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 PLOD3O60568 738 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 ABCD3P28288 659 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 HPCAL1P37235 193 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 MC3RP41968 323 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 DNASE1L1P49184 302 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 PRAMEF20Q5VT98 475 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 TMEM107Q6UX40 140 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 FBXW8Q8N3Y1 598 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 HSPBAP1Q96EW2 488 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 MAGED4Q96JG8 741 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 PPP1R36Q96LQ0 422 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 AMDHD1Q96NU7 426 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 SH2D2AQ9NP31 389 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 CNIH4Q9P003 139 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 HAO1Q9UJM8 370 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 CHCHD2Q9Y6H1 151 aaPredicted RBP19.15■□□□□ 0.66
NELFE-208ENST00000481121 DIDO1Q9BTC0 2240 aaKnown RBP19.15■□□□□ 0.66
NELFE-208ENST00000481121 FLNBO75369 2602 aaKnown RBP19.15■□□□□ 0.66
NELFE-208ENST00000481121 USP9YO00507 2555 aaPredicted RBP19.15■□□□□ 0.66
NELFE-208ENST00000481121 TP53I11O14683 189 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 ACOX3O15254 700 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 ASNA1O43681 348 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 TBX19O60806 448 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 COQ9O75208 318 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 WISP2O76076 250 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 FBXW4P57775 412 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 KCNJ2P63252 427 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 MAD2L1Q13257 205 aaPredicted RBP19.15■□□□□ 0.66
NELFE-208ENST00000481121 PDE7AQ13946 482 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 ZNF385BQ569K4 471 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 BNC2Q6ZN30 1099 aaPredicted RBP19.15■□□□□ 0.66
NELFE-208ENST00000481121 R3HCC1LQ7Z5L2 792 aaKnown RBP19.15■□□□□ 0.66
NELFE-208ENST00000481121 GHDCQ8N2G8 530 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 SSC4DQ8WTU2 575 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 ARL8AQ96BM9 186 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 MTERF3Q96E29 417 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 TTTY12Q9BZ98 90 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 DDX18Q9NVP1 670 aaKnown RBP19.15■□□□□ 0.66
NELFE-208ENST00000481121 TAS2R9Q9NYW1 312 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 SH3BP4Q9P0V3 963 aa19.15■□□□□ 0.66
NELFE-208ENST00000481121 ERRFI1Q9UJM3 462 aaPredicted RBP19.15■□□□□ 0.66
NELFE-208ENST00000481121 ZNF407Q9C0G0 2248 aa19.14■□□□□ 0.66
NELFE-208ENST00000481121 A0A087WV62 115 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 FRG2CA6NGY1 282 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 STSP08842 583 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 PRPS2P11908 318 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 H2AFXP16104 143 aaPredicted RBP19.14■□□□□ 0.65
NELFE-208ENST00000481121 DDX5P17844 614 aaKnown RBP19.14■□□□□ 0.65
NELFE-208ENST00000481121 PIGAP37287 484 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 RPL3P39023 403 aaKnown RBP19.14■□□□□ 0.65
NELFE-208ENST00000481121 PPICP45877 212 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 PLCXD2Q0VAA5 305 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 ZNF155Q12901 538 aaPredicted RBP19.14■□□□□ 0.65
NELFE-208ENST00000481121 HSPB3Q12988 150 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 PTGR1Q14914 329 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 C4orf17Q53FE4 359 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 IL23RQ5VWK5 629 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 HDXQ7Z353 690 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 SLC22A16Q86VW1 577 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 ZFP28Q8NHY6 868 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 RAB3IL1Q8TBN0 382 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 DIO2Q92813 273 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 CIDECQ96AQ7 238 aaPredicted RBP19.14■□□□□ 0.65
NELFE-208ENST00000481121 FOLH1BQ9HBA9 442 aa19.14■□□□□ 0.65
NELFE-208ENST00000481121 EIF3LQ9Y262 564 aaKnown RBP19.14■□□□□ 0.65
NELFE-208ENST00000481121 DNAJC13O75165 2243 aa19.13■□□□□ 0.65
NELFE-208ENST00000481121 FAM166BA8MTA8 275 aa19.13■□□□□ 0.65
NELFE-208ENST00000481121 SCAMP2O15127 329 aaKnown RBP19.13■□□□□ 0.65
NELFE-208ENST00000481121 CDC40O60508 579 aaKnown RBP eCLIP19.13■□□□□ 0.65
NELFE-208ENST00000481121 SLC19A2O60779 497 aa19.13■□□□□ 0.65
NELFE-208ENST00000481121 ERN1O75460 977 aaKnown RBP19.13■□□□□ 0.65
NELFE-208ENST00000481121 DRD5P21918 477 aa19.13■□□□□ 0.65
NELFE-208ENST00000481121 GPC1P35052 558 aa19.13■□□□□ 0.65
NELFE-208ENST00000481121 PPIAP62937 165 aaKnown RBP19.13■□□□□ 0.65
NELFE-208ENST00000481121 RPP38P78345 283 aaKnown RBP19.13■□□□□ 0.65
NELFE-208ENST00000481121 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.13■□□□□ 0.658e-9■■■■□ 19.8
NELFE-208ENST00000481121 C1QL3Q5VWW1 255 aa19.13■□□□□ 0.65
NELFE-208ENST00000481121 ATG16L1Q676U5 607 aa19.13■□□□□ 0.65
NELFE-208ENST00000481121 RGS9BPQ6ZS82 235 aa19.13■□□□□ 0.65
NELFE-208ENST00000481121 TRIM42Q8IWZ5 723 aa19.13■□□□□ 0.65
NELFE-208ENST00000481121 OMA1Q96E52 524 aa19.13■□□□□ 0.65
NELFE-208ENST00000481121 ZBED6CLQ96FA7 236 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms