RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SNX13Q9Y5W8 968 aa16.38■□□□□ 0.21
UPF3A-206ENST00000480362 ZNF292O60281 2723 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 IGHV3-20A0A0C4DH32 117 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 CDRT15L2A8MXV6 281 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 GMNNO75496 209 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 STAMBPO95630 424 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 GGT1P19440 569 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 FOLR3P41439 243 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 MAN2A2P49641 1150 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 ACTR3P61158 418 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 TXNL4AP83876 142 aaKnown RBP16.37■□□□□ 0.21
UPF3A-206ENST00000480362 RBBP4Q09028 425 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 ZCCHC12Q6PEW1 402 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 CPEB2Q7Z5Q1 589 aaKnown RBP16.37■□□□□ 0.21
UPF3A-206ENST00000480362 PROSER1Q86XN7 944 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 C11orf65Q8NCR3 313 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 HIPK4Q8NE63 616 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 OR7G1Q8NGA0 311 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 OR2Y1Q8NGV0 311 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 ADAMTS15Q8TE58 950 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 FIG4Q92562 907 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 JADE3Q92613 823 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 DAZLQ92904 295 aaKnown RBP16.37■□□□□ 0.21
UPF3A-206ENST00000480362 FBXL20Q96IG2 436 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 OR7D2Q96RA2 312 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 MESP1Q9BRJ9 268 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 OR8D2Q9GZM6 311 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 C19orf25Q9UFG5 118 aaPredicted RBP16.37■□□□□ 0.21
UPF3A-206ENST00000480362 PADI2Q9Y2J8 665 aa16.37■□□□□ 0.21
UPF3A-206ENST00000480362 SDK2Q58EX2 2172 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 STMND1H3BQB6 276 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 CXCR6O00574 342 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 DDAH2O95865 285 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 CLPSP04118 112 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 ARAFP10398 606 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 ACP2P11117 423 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 ATP6V1B2P21281 511 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 CD82P27701 267 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 PCGF2P35227 344 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 EMDP50402 254 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 ERFP50548 548 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 RPS15P62841 145 aaKnown RBP16.36■□□□□ 0.21
UPF3A-206ENST00000480362 CCNIQ14094 377 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 SCARB2Q14108 478 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 ZNF630Q2M218 657 aaPredicted RBP16.36■□□□□ 0.21
UPF3A-206ENST00000480362 IGF2-ASQ6U949 168 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 CYP2R1Q6VVX0 501 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 SPPL2CQ8IUH8 684 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 LGI4Q8N135 537 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 ZNF321PQ8N8H1 164 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 ZNF615Q8N8J6 731 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 CDRT4Q8N9R6 151 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 SLC16A11Q8NCK7 471 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 MORN4Q8NDC4 146 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 BHLHE22Q8NFJ8 381 aaPredicted RBP16.36■□□□□ 0.21
UPF3A-206ENST00000480362 NFKBIDQ8NI38 313 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 SLC2A12Q8TD20 617 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 ZNF721Q8TF20 911 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 SLC9A6Q92581 669 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 SLC35A4Q96G79 324 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 ART5Q96L15 291 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 LRGUKQ96M69 825 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 FOLH1BQ9HBA9 442 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 A4GALTQ9NPC4 353 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 ASCL3Q9NQ33 180 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 THUMPD1Q9NXG2 353 aaKnown RBP16.36■□□□□ 0.21
UPF3A-206ENST00000480362 MAGEL2Q9UJ55 1249 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 HEMK1Q9Y5R4 338 aaPredicted RBP16.36■□□□□ 0.21
UPF3A-206ENST00000480362 KCNE3Q9Y6H6 103 aa16.36■□□□□ 0.21
UPF3A-206ENST00000480362 DUXAA6NLW8 204 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 ASNA1O43681 348 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 PRAMEF2O60811 474 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 IGKV3-11P04433 115 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 ALOX5P09917 674 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 TFPTP0C1Z6 253 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 DLSTP36957 453 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 STAT5AP42229 794 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 CDK6Q00534 326 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 EEF1A2Q05639 463 aaKnown RBP16.35■□□□□ 0.21
UPF3A-206ENST00000480362 ZNF155Q12901 538 aaPredicted RBP16.35■□□□□ 0.21
UPF3A-206ENST00000480362 DNASE1L3Q13609 305 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 VEZF1Q14119 521 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 EXOSC6Q5RKV6 272 aaKnown RBP16.35■□□□□ 0.21
UPF3A-206ENST00000480362 LCN8Q6JVE9 175 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 SLC44A2Q8IWA5 706 aaPredicted RBP16.35■□□□□ 0.21
UPF3A-206ENST00000480362 C16orf52Q8NHV5 167 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 SLC38A5Q8WUX1 472 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 NCLNQ969V3 563 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 C8orf44Q96CB5 159 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 NUDT9Q9BW91 350 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 NRSN2Q9GZP1 204 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 GORASP2Q9H8Y8 452 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 TCFL5Q9UL49 500 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 GVINP1Q7Z2Y8 2422 aa16.35■□□□□ 0.21
UPF3A-206ENST00000480362 KNTC1P50748 2209 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 LOC102723996A0A087X1L8 192 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 LOC101059948A0A1B0GTJ6 334 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 PRAMEF27A3QJZ7 478 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 TMEM247A6NEH6 219 aa16.34■□□□□ 0.21
UPF3A-206ENST00000480362 SAGE2PA6NJ88 616 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms