RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 CSAG2Q9Y5P2 127 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 BSNQ9UPA5 3926 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 COL6A6A6NMZ7 2263 aa18.26■□□□□ 0.51
LIME1-205ENST00000480139 SPTA1P02549 2419 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 TRAV17A0A0B4J275 112 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 ACOX3O15254 700 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 PGRP06401 933 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 DRD5P21918 477 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 PHC1P78364 1004 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 NFATC3Q12968 1075 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 ZNF169Q14929 603 aaPredicted RBP18.25■□□□□ 0.51
LIME1-205ENST00000480139 NADK2Q4G0N4 442 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 MDS2Q8NDY4 140 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 ASB15Q8WXK1 588 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 MOAP1Q96BY2 351 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 LCORQ96JN0 433 aaPredicted RBP18.25■□□□□ 0.51
LIME1-205ENST00000480139 RILPQ96NA2 401 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 ITPAQ9BY32 194 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 FOLH1BQ9HBA9 442 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 COPG1Q9Y678 874 aaKnown RBP18.25■□□□□ 0.51
LIME1-205ENST00000480139 KALRNO60229 2985 aa18.25■□□□□ 0.51
LIME1-205ENST00000480139 CNTRLQ7Z7A1 2325 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 TTC36A6NLP5 189 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 EMC8O43402 210 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 NEURL1O76050 574 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 C6orf47O95873 294 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 EFNA1P20827 205 aaPredicted RBP18.24■□□□□ 0.51
LIME1-205ENST00000480139 LSP1P33241 339 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 SOX3P41225 446 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 ZFP36L2P47974 494 aaKnown RBP18.24■□□□□ 0.51
LIME1-205ENST00000480139 ARFIP2P53365 341 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 NRG3P56975 720 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 HBA1P69905 142 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 PRR5P85299 388 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 OC90Q02509 493 aaPredicted RBP18.24■□□□□ 0.51
LIME1-205ENST00000480139 SQLEQ14534 574 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 OR1C1Q15619 314 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 ZNF468Q5VIY5 522 aaPredicted RBP18.24■□□□□ 0.51
LIME1-205ENST00000480139 LYPD8Q6UX82 237 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 MSANTD1Q6ZTZ1 278 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 CATSPER1Q8NEC5 780 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 SFXN5Q8TD22 340 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 HOXB13Q92826 284 aaPredicted RBP18.24■□□□□ 0.51
LIME1-205ENST00000480139 FAM120BQ96EK7 910 aaKnown RBP18.24■□□□□ 0.51
LIME1-205ENST00000480139 HSPBAP1Q96EW2 488 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 MS4A4EQ96PG1 132 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.24■□□□□ 0.515e-9■■■■□ 24.5
LIME1-205ENST00000480139 NXF5Q9H1B4 397 aaKnown RBP18.24■□□□□ 0.51
LIME1-205ENST00000480139 RABEP2Q9H5N1 569 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 ZNF385DQ9H6B1 395 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 MRGBPQ9NV56 204 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 LRFN1Q9P244 771 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 BTNL2Q9UIR0 455 aa18.24■□□□□ 0.51
LIME1-205ENST00000480139 GPR55Q9Y2T6 319 aaPredicted RBP18.24■□□□□ 0.51
LIME1-205ENST00000480139 EXPH5Q8NEV8 1989 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 FAM234BA2RU67 622 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 FRG2CA6NGY1 282 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 A8MVJ9 347 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 TO15178 435 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 ZNF354AO60765 605 aaPredicted RBP18.23■□□□□ 0.51
LIME1-205ENST00000480139 ERN1O75460 977 aaKnown RBP18.23■□□□□ 0.51
LIME1-205ENST00000480139 SORBS2O94875 1100 aaKnown RBP18.23■□□□□ 0.51
LIME1-205ENST00000480139 OR6B1O95007 311 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 F10P00742 488 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 FBXO45P0C2W1 286 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 NR0B1P51843 470 aaKnown RBP18.23■□□□□ 0.51
LIME1-205ENST00000480139 POLR2JP52435 117 aaKnown RBP18.23■□□□□ 0.51
LIME1-205ENST00000480139 PAOXQ6QHF9 649 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 ZNF227Q86WZ6 799 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 PTRH1Q86Y79 214 aaKnown RBP18.23■□□□□ 0.51
LIME1-205ENST00000480139 CLECL1Q8IZS7 167 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 CYP4Z2PQ8N1L4 340 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 NUP43Q8NFH3 380 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 GOT1L1Q8NHS2 421 aaPredicted RBP18.23■□□□□ 0.51
LIME1-205ENST00000480139 SPACA9Q96E40 222 aaPredicted RBP18.23■□□□□ 0.51
LIME1-205ENST00000480139 SGCZQ96LD1 299 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 CCDC115Q96NT0 180 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 SIGLEC12Q96PQ1 595 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 LMF2Q9BU23 707 aaKnown RBP18.23■□□□□ 0.51
LIME1-205ENST00000480139 MFRPQ9BY79 579 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 TRIM4Q9C037 500 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 CXorf36Q9H7Y0 433 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 HPF1Q9NWY4 346 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 ANKRD10Q9NXR5 420 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 PCDHGB4Q9UN71 923 aa18.23■□□□□ 0.51
LIME1-205ENST00000480139 CFAP46Q8IYW2 2715 aa18.22■□□□□ 0.51
LIME1-205ENST00000480139 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.22■□□□□ 0.51
LIME1-205ENST00000480139 EIF4E1BA6NMX2 242 aaKnown RBP18.22■□□□□ 0.51
LIME1-205ENST00000480139 CAPN14A8MX76 684 aa18.22■□□□□ 0.51
LIME1-205ENST00000480139 CFLARO15519 480 aa18.22■□□□□ 0.51
LIME1-205ENST00000480139 C1QL1O75973 258 aa18.22■□□□□ 0.51
LIME1-205ENST00000480139 CT45A8P0DMV1 189 aa18.22■□□□□ 0.51
LIME1-205ENST00000480139 CT45A9P0DMV2 189 aa18.22■□□□□ 0.51
LIME1-205ENST00000480139 CD46P15529 392 aa18.22■□□□□ 0.51
LIME1-205ENST00000480139 NAGAP17050 411 aa18.22■□□□□ 0.51
LIME1-205ENST00000480139 MAP3K8P41279 467 aa18.22■□□□□ 0.51
LIME1-205ENST00000480139 TMED10P49755 219 aaKnown RBP18.22■□□□□ 0.51
LIME1-205ENST00000480139 DGKQP52824 942 aa18.22■□□□□ 0.51
LIME1-205ENST00000480139 GYS2P54840 703 aa18.22■□□□□ 0.51
LIME1-205ENST00000480139 ZNF155Q12901 538 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms