RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 PROK2Q9HC23 129 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 NPDC1Q9NQX5 325 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-218ENST00000479554 QPCTLQ9NXS2 382 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 SPRR3Q9UBC9 169 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 TRPS1Q9UHF7 1281 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 PCDHA9Q9Y5H5 950 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 FAM215AQ9Y5M1 114 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 NPFFR2Q9Y5X5 522 aa13.17□□□□□ -0.3
ATG4B-218ENST00000479554 DNAJC13O75165 2243 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 C1orf226A1L170 272 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 PPP6CO00743 305 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 TOXO94900 526 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 SBK3P0C264 359 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 GLI4P10075 376 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 GABRA1P14867 456 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 PORP16435 677 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-218ENST00000479554 IGFBP2P18065 325 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 ENDOUP21128 410 aaKnown RBP13.16□□□□□ -0.3
ATG4B-218ENST00000479554 GDF1P27539 372 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 MSX1P28360 303 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 FBXW4P57775 412 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 GALNT1Q10472 559 aaPredicted RBP13.16□□□□□ -0.3
ATG4B-218ENST00000479554 C1orf185Q5T7R7 199 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 TMEM198Q66K66 360 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 SLC48A1Q6P1K1 146 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 TMEM64Q6YI46 380 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 VWA5B2Q8N398 1253 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 ZNF615Q8N8J6 731 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 OR7G1Q8NGA0 311 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 TRPC4APQ8TEL6 797 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 HBEGFQ99075 208 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 BRINP2Q9C0B6 783 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 SLC6A15Q9H2J7 730 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 MCCC2Q9HCC0 563 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 NMRK1Q9NWW6 199 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 ALKBH4Q9NXW9 302 aa13.16□□□□□ -0.3
ATG4B-218ENST00000479554 POLQO75417 2590 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 ANKRD33BA6NCL7 494 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 FAM47E-STBD1D6RA91 191 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 BIRC5O15392 142 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 ERAL1O75616 437 aaKnown RBP13.15□□□□□ -0.3
ATG4B-218ENST00000479554 SUPT7LO94864 414 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 OR4F21O95013 312 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 CAPN3P20807 821 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 ZFP36L2P47974 494 aaKnown RBP13.15□□□□□ -0.3
ATG4B-218ENST00000479554 TRPC1P48995 793 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 RPP38P78345 283 aaKnown RBP13.15□□□□□ -0.3
ATG4B-218ENST00000479554 CLCQ05315 142 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 CCDC153Q494R4 210 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 RTL6Q6ICC9 239 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 MMP21Q8N119 569 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 TMEM151AQ8N4L1 468 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 CDYL2Q8N8U2 506 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 C17orf47Q8NEP4 570 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 NEIL3Q8TAT5 605 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 SPPL2AQ8TCT8 520 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 ZNF75CPQ92670 426 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-218ENST00000479554 ADIPOR1Q96A54 375 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 KLHL29Q96CT2 875 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 RILPQ96NA2 401 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 SECISBP2Q96T21 854 aaKnown RBP13.15□□□□□ -0.3
ATG4B-218ENST00000479554 FAIM2Q9BWQ8 316 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 C12orf65Q9H3J6 166 aaKnown RBP13.15□□□□□ -0.3
ATG4B-218ENST00000479554 ACKR4Q9NPB9 350 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 CES1P1Q9UKY3 287 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 PSME2Q9UL46 239 aa13.15□□□□□ -0.3
ATG4B-218ENST00000479554 C15orf38-AP3S2A0A0A6YYH1 394 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 A0A0G2JNJ9 132 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 WDR91A4D1P6 747 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 PLIN3O60664 434 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 TRIM3O75382 744 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-218ENST00000479554 KRT6AP02538 564 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 KRT6BP04259 564 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 ATP1B1P05026 303 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 HOXD4P09016 255 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-218ENST00000479554 NEFHP12036 1026 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 HSD3B1P14060 373 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 CSNK2A2P19784 350 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-218ENST00000479554 GPX3P22352 226 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 HSD3B2P26439 372 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 FEN1P39748 380 aaKnown RBP13.14□□□□□ -0.31
ATG4B-218ENST00000479554 KRT6CP48668 564 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 MASP1P48740 699 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 ALDH9A1P49189 494 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 KRTAP10-9P60411 292 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 NNATQ16517 81 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 ZSCAN26Q16670 478 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 PRICKLE4Q2TBC4 344 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 TCHHL1Q5QJ38 904 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-218ENST00000479554 ZNF678Q5SXM1 525 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 GKAP1Q5VSY0 366 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-218ENST00000479554 FAM219BQ5XKK7 198 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 BICRALQ6AI39 1079 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 GPRIN3Q6ZVF9 776 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 DMRTC2Q8IXT2 367 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-218ENST00000479554 ULK2Q8IYT8 1036 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 PRR22Q8IZ63 422 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 C1orf52Q8N6N3 182 aaKnown RBP13.14□□□□□ -0.31
ATG4B-218ENST00000479554 CCDC63Q8NA47 563 aa13.14□□□□□ -0.31
ATG4B-218ENST00000479554 RAB3IL1Q8TBN0 382 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms