RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 AGR3Q8TD06 166 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ADAMTS18Q8TE60 1221 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 UTP15Q8TED0 518 aaKnown RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 JADE3Q92613 823 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 BORCS5Q969J3 196 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 FKBP10Q96AY3 582 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 SLC7A6OSQ96CW6 309 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 MS4A6EQ96DS6 147 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 MOCOSQ96EN8 888 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 MPP4Q96JB8 637 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 C10orf90Q96M02 699 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 SERINC2Q96SA4 455 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 PRPF18Q99633 342 aaKnown RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 TBCDQ9BTW9 1192 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 NPLQ9BXD5 320 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 MS4A8Q9BY19 250 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 DPH1Q9BZG8 443 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 SHCBP1LQ9BZQ2 653 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF696Q9H7X3 374 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 MKKSQ9NPJ1 570 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 LHX9Q9NQ69 397 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 TBC1D23Q9NUY8 699 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ATAD3AQ9NVI7 634 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 C14orf105Q9NVL8 296 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ARMC1Q9NVT9 282 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 GID8Q9NWU2 228 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 C6orf203Q9P0P8 240 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 DHCR7Q9UBM7 475 aaKnown RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 VPS29Q9UBQ0 182 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF282Q9UDV7 671 aaPredicted RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 NXT1Q9UKK6 140 aaKnown RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 RABL2BQ9UNT1 228 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 MRPS33Q9Y291 106 aaKnown RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 NAALAD2Q9Y3Q0 740 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 PCDHGA9Q9Y5G4 932 aaKnown RBP5.82□□□□□ -1.48
SF3B1-209ENST00000479532 PCDHGA6Q9Y5G7 932 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 N6AMT1Q9Y5N5 214 aa5.82□□□□□ -1.48
SF3B1-209ENST00000479532 CFAP54Q96N23 3096 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 KNTC1P50748 2209 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 A0A0A6YYC8 382 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 MAGEB17A8MXT2 336 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 I3L1I5 382 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 OVOL3O00110 214 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 PPP6CO00743 305 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 UBFD1O14562 309 aaKnown RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 DENRO43583 198 aaKnown RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 HCRTR1O43613 425 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 GALR3O60755 368 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 CNOT3O75175 753 aaKnown RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 VPS4BO75351 444 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 TRMUO75648 421 aaKnown RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 RSL1D1O76021 490 aaKnown RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 KLHL18O94889 574 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 APOL3O95236 402 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 IGHEP01854 428 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 C8BP07358 591 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 CHRNGP07510 517 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 RAB40ALP0C0E4 278 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 RNH1P13489 461 aaKnown RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 DDX5P17844 614 aaKnown RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 IL1RNP18510 177 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 TCN2P20062 427 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 IL10P22301 178 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 ENPP1P22413 925 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 JAK1P23458 1154 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 TLX1P31314 330 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 RORAP35398 523 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 DLSTP36957 453 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 FOLR3P41439 243 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 CCR10P46092 362 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 HSPA13P48723 471 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 RPL14P50914 215 aaKnown RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 CHN2P52757 468 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 PLA2G16P53816 162 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 NR1H2P55055 460 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 MANFP55145 182 aaKnown RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 RAB8AP61006 207 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 AP2B1P63010 937 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 BTN3A2P78410 334 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 MC1RQ01726 317 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 ACSM2AQ08AH3 577 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 BST1Q10588 318 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 MAD2L1Q13257 205 aaPredicted RBP5.81□□□□□ -1.48
SF3B1-209ENST00000479532 ODF1Q14990 250 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 ADPRMQ3LIE5 342 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 NKAIN1Q4KMZ8 207 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 DEFB134Q4QY38 66 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 ATP6AP1LQ52LC2 224 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 SMUG1Q53HV7 270 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 CT83Q5H943 113 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 PRAMEF17Q5VTA0 474 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 MLIPQ5VWP3 458 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 KANK2Q63ZY3 851 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 ACSM2BQ68CK6 577 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 CLEC6AQ6EIG7 209 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 OR4C11Q6IEV9 310 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 TEPPQ6URK8 271 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 RNF165Q6ZSG1 346 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 LURAP1LQ8IV03 231 aa5.81□□□□□ -1.48
SF3B1-209ENST00000479532 METTL27Q8N6F8 245 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms