RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 NPFFR2Q9Y5X5 522 aa18.91■□□□□ 0.62
VARS-224ENST00000479051 ASPDHA6ND91 283 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 FRG2CA6NGY1 282 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 TCP11X1B4DZS4 312 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 ATP8B1O43520 1251 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 ZNF354AO60765 605 aaPredicted RBP18.9■□□□□ 0.62
VARS-224ENST00000479051 DRD5P21918 477 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 SOX18P35713 384 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 FRKP42685 505 aaPredicted RBP18.9■□□□□ 0.62
VARS-224ENST00000479051 DIO3P55073 304 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 C21orf58P58505 322 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 ZNF155Q12901 538 aaPredicted RBP18.9■□□□□ 0.62
VARS-224ENST00000479051 FHL5Q5TD97 284 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 SLC22A10Q63ZE4 541 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 OR2L13Q8N349 312 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 FAM13CQ8NE31 585 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 CKAP2Q8WWK9 683 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 NR4A3Q92570 626 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 MAGED4Q96JG8 741 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 BHLHE41Q9C0J9 482 aaPredicted RBP18.9■□□□□ 0.62
VARS-224ENST00000479051 NXF5Q9H1B4 397 aaKnown RBP18.9■□□□□ 0.62
VARS-224ENST00000479051 FOLH1BQ9HBA9 442 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 MED4Q9NPJ6 270 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 DTX4Q9Y2E6 619 aa18.9■□□□□ 0.62
VARS-224ENST00000479051 GOLGA8QA0A0J9YX86 632 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 GOLGA8OA6NCC3 632 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 GOLGA8NF8WBI6 632 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 PYCARD-AS1I3L0S3 204 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 PEX1O43933 1283 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 ERN1O75460 977 aaKnown RBP18.89■□□□□ 0.61
VARS-224ENST00000479051 LAMP1P11279 417 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 EDN3P14138 238 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 NAGAP17050 411 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 EPHA3P29320 983 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 MEOX1P50221 254 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 CLNS1AP54105 237 aaKnown RBP18.89■□□□□ 0.61
VARS-224ENST00000479051 PMP22Q01453 160 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 ALDH6A1Q02252 535 aaKnown RBP18.89■□□□□ 0.61
VARS-224ENST00000479051 MLC1Q15049 377 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 RPS6KA2Q15349 733 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 ZNHIT3Q15649 155 aaPredicted RBP18.89■□□□□ 0.61
VARS-224ENST00000479051 NNATQ16517 81 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 NTRK2Q16620 822 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 PGS1Q32NB8 556 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 LSM12Q3MHD2 195 aaKnown RBP18.89■□□□□ 0.61
VARS-224ENST00000479051 LYPD8Q6UX82 237 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 GK5Q6ZS86 529 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 SULF2Q8IWU5 870 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 RIMKLAQ8IXN7 391 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 KRTCAP2Q8N6L1 136 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 ST6GALNAC3Q8NDV1 305 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 SIMC1Q8NDZ2 872 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 CEP70Q8NHQ1 597 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 COQ8BQ96D53 544 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 FRMD6Q96NE9 622 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 BTBD9Q96Q07 612 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 WDR55Q9H6Y2 383 aaPredicted RBP18.89■□□□□ 0.61
VARS-224ENST00000479051 ANKRA2Q9H9E1 313 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 C3orf14Q9HBI5 128 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 CNIH4Q9P003 139 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 GPR55Q9Y2T6 319 aaPredicted RBP18.89■□□□□ 0.61
VARS-224ENST00000479051 USH1CQ9Y6N9 552 aa18.89■□□□□ 0.61
VARS-224ENST00000479051 A0A1W2PRB8 838 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 UPK1AO00322 258 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 TGDSO95455 350 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 ZNF24P17028 368 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 CNR1P21554 472 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 ABCD3P28288 659 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 KRT20P35900 424 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 KCNC4Q03721 635 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 PLCXD2Q0VAA5 305 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 FAM47EQ6ZV65 393 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 ACAD11Q709F0 780 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 CAMKMTQ7Z624 323 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 SLC34A3Q8N130 599 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 ACTRT2Q8TDY3 377 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 PAQR8Q8TEZ7 354 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 VSTM2LQ96N03 204 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 SLX1AQ9BQ83 275 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 FAM173AQ9BQD7 235 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 DUSP26Q9BV47 211 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 SLCO1B3Q9NPD5 702 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 AIG1Q9NVV5 245 aa18.88■□□□□ 0.61
VARS-224ENST00000479051 ANKUB1A6NFN9 424 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 TTC36A6NLP5 189 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 TO15178 435 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 DIAPH2O60879 1101 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 PPM1BO75688 479 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 CCL3P10147 92 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 GPR85P60893 370 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 PRR5P85299 388 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 SRSF11Q05519 484 aaKnown RBP18.87■□□□□ 0.61
VARS-224ENST00000479051 DPY19L1Q2PZI1 675 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 TBCELQ5QJ74 424 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 ZNF324BQ6AW86 544 aaPredicted RBP18.87■□□□□ 0.61
VARS-224ENST00000479051 TMEM64Q6YI46 380 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 SZRD1Q7Z422 152 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 PRR22Q8IZ63 422 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 FBXW8Q8N3Y1 598 aa18.87■□□□□ 0.61
VARS-224ENST00000479051 CPSF7Q8N684 471 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms