RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 LCORQ96JN0 433 aaPredicted RBP14.35□□□□□ -0.11
HMGA1-206ENST00000478214 AMDHD1Q96NU7 426 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 C1orf50Q9BV19 199 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 REEP4Q9H6H4 257 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 PRODH2Q9UF12 536 aa14.35□□□□□ -0.11
HMGA1-206ENST00000478214 SPTAN1Q13813 2472 aaKnown RBP14.35□□□□□ -0.11
HMGA1-206ENST00000478214 FAM166BA8MTA8 275 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 PLOD3O60568 738 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 BCAS2O75934 225 aaPredicted RBP14.34□□□□□ -0.11
HMGA1-206ENST00000478214 ABCD3P28288 659 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 MC3RP41968 323 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 PPICP45877 212 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 ASMTP46597 345 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 PPIAP62937 165 aaKnown RBP14.34□□□□□ -0.11
HMGA1-206ENST00000478214 RBPJQ06330 500 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 FOXO1Q12778 655 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 PDE7AQ13946 482 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 RPS6KA2Q15349 733 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 PDCD2Q16342 344 aaPredicted RBP14.34□□□□□ -0.11
HMGA1-206ENST00000478214 TMEM107Q6UX40 140 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 GK5Q6ZS86 529 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 CHERPQ8IWX8 916 aaKnown RBP14.34□□□□□ -0.11
HMGA1-206ENST00000478214 GHDCQ8N2G8 530 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 FBXW8Q8N3Y1 598 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 LIX1Q8N485 282 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 FNDC5Q8NAU1 212 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 OR52N2Q8NGI0 321 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 SSC4DQ8WTU2 575 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 CIDECQ96AQ7 238 aaPredicted RBP14.34□□□□□ -0.11
HMGA1-206ENST00000478214 PPCDCQ96CD2 204 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 TUBGCP3Q96CW5 907 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 PPP1R36Q96LQ0 422 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 TTTY12Q9BZ98 90 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 PROK2Q9HC23 129 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 RYDENQ9NUL5 291 aaKnown RBP14.34□□□□□ -0.11
HMGA1-206ENST00000478214 TUBA8Q9NY65 449 aaPredicted RBP14.34□□□□□ -0.11
HMGA1-206ENST00000478214 CNIH4Q9P003 139 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 CNOT11Q9UKZ1 510 aaKnown RBP14.34□□□□□ -0.11
HMGA1-206ENST00000478214 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.34□□□□□ -0.11
HMGA1-206ENST00000478214 GPR55Q9Y2T6 319 aaPredicted RBP14.34□□□□□ -0.11
HMGA1-206ENST00000478214 CROCCQ5TZA2 2017 aa14.34□□□□□ -0.11
HMGA1-206ENST00000478214 SETXQ7Z333 2677 aaKnown RBP14.33□□□□□ -0.12
HMGA1-206ENST00000478214 TRGV8A0A0C4DH27 118 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 CAPN14A8MX76 684 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 TP53I11O14683 189 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 PDPK1O15530 556 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 SLC19A2O60779 497 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 TBX19O60806 448 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 GLSO94925 669 aaPredicted RBP14.33□□□□□ -0.12
HMGA1-206ENST00000478214 LDLRP01130 860 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 DRD5P21918 477 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 MAPK1P28482 360 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 TMED10P49755 219 aaKnown RBP14.33□□□□□ -0.12
HMGA1-206ENST00000478214 RPL14P50914 215 aaKnown RBP14.33□□□□□ -0.12
HMGA1-206ENST00000478214 SLC18A1P54219 525 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 DCAF7P61962 342 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 AGBL2Q5U5Z8 902 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 IL23RQ5VWK5 629 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 BICRALQ6AI39 1079 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 ZNF551Q7Z340 670 aaPredicted RBP14.33□□□□□ -0.12
HMGA1-206ENST00000478214 FGD2Q7Z6J4 655 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 FJX1Q86VR8 437 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 TMEM251Q8N6I4 163 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 DIO2Q92813 273 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 OMA1Q96E52 524 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 HSPBAP1Q96EW2 488 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 ZNF764Q96H86 408 aaPredicted RBP14.33□□□□□ -0.12
HMGA1-206ENST00000478214 VSTM2LQ96N03 204 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 DEFB127Q9H1M4 99 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 IL1RL2Q9HB29 575 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 FOLH1BQ9HBA9 442 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 PNPOQ9NVS9 261 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 NKIRAS1Q9NYS0 192 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 SH3BP4Q9P0V3 963 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 SH3BGRL2Q9UJC5 107 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 HAO1Q9UJM8 370 aa14.33□□□□□ -0.12
HMGA1-206ENST00000478214 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.33□□□□□ -0.12
HMGA1-206ENST00000478214 DOPEY1Q5JWR5 2465 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 A0A087WV62 115 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 FRG2CA6NGY1 282 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 ACOT7O00154 380 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 PLOD2O00469 737 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 ACOX3O15254 700 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 CDC40O60508 579 aaKnown RBP eCLIP14.32□□□□□ -0.12
HMGA1-206ENST00000478214 PPM1BO75688 479 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 PDE9AO76083 593 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 SNUPNO95149 360 aaKnown RBP14.32□□□□□ -0.12
HMGA1-206ENST00000478214 ABCB1P08183 1280 aaPredicted RBP14.32□□□□□ -0.12
HMGA1-206ENST00000478214 CORO7P57737 925 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 KCNJ2P63252 427 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 PLCXD2Q0VAA5 305 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 HSPB3Q12988 150 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 PTGR1Q14914 329 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 C3AR1Q16581 482 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 DESI1Q6ICB0 168 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 NPSR1Q6W5P4 371 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 BNC2Q6ZN30 1099 aaPredicted RBP14.32□□□□□ -0.12
HMGA1-206ENST00000478214 SLC22A16Q86VW1 577 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 SPPL2CQ8IUH8 684 aa14.32□□□□□ -0.12
HMGA1-206ENST00000478214 SPPL2AQ8TCT8 520 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms