RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 PLOD3O60568 738 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 TBX19O60806 448 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 RASAL1O95294 804 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 PRPS1L1P21108 318 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 NME2P22392 152 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 RPL3P39023 403 aaKnown RBP9.48□□□□□ -0.89
HDAC6-222ENST00000478095 RFC3P40938 356 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 EMDP50402 254 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 MANFP55145 182 aaKnown RBP9.48□□□□□ -0.89
HDAC6-222ENST00000478095 CLDN8P56748 225 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 CORO7P57737 925 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 ZNF155Q12901 538 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-222ENST00000478095 SMU1Q2TAY7 513 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 PGS1Q32NB8 556 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 CPTPQ5TA50 214 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 OPN5Q6U736 354 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 FAM180AQ6UWF9 173 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 LYPD8Q6UX82 237 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 SZRD1Q7Z422 152 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 WDR53Q7Z5U6 358 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-222ENST00000478095 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-222ENST00000478095 RIMKLAQ8IXN7 391 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 TMEM178AQ8NBL3 297 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 FAM13CQ8NE31 585 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 ZFP28Q8NHY6 868 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 MTERF3Q96E29 417 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 ELP4Q96EB1 424 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 ZBED6CLQ96FA7 236 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-222ENST00000478095 MAELQ96JY0 434 aaKnown RBP9.48□□□□□ -0.89
HDAC6-222ENST00000478095 MAGEB18Q96M61 343 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 DPY30Q9C005 99 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 TRIM45Q9H8W5 580 aaPredicted RBP9.48□□□□□ -0.89
HDAC6-222ENST00000478095 EQTNQ9NQ60 294 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 AIG1Q9NVV5 245 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 PRODH2Q9UF12 536 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 CFL2Q9Y281 166 aa9.48□□□□□ -0.89
HDAC6-222ENST00000478095 COL6A6A6NMZ7 2263 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 A0A0G2JMM0 328 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 A0A1W2PPB8 328 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 A0A1W2PRB8 838 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 A0A1W2PRS3 328 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 KIR3DP1A8MWS1 328 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 TCP11X1B4DZS4 312 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 COQ9O75208 318 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 BCAS2O75934 225 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-222ENST00000478095 C6orf47O95873 294 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 CCL3P10147 92 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 DDX5P17844 614 aaKnown RBP9.47□□□□□ -0.89
HDAC6-222ENST00000478095 FRKP42685 505 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-222ENST00000478095 PRKAG1P54619 331 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 AQP5P55064 265 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 NRG3P56975 720 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 FBXW4P57775 412 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 PRR20EP86478 221 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 PRR20CP86479 221 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 PRR20DP86480 221 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 PRR20BP86481 221 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 PRR20AP86496 221 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 PLCXD2Q0VAA5 305 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 ZNF791Q3KP31 576 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-222ENST00000478095 PRAMEF20Q5VT98 475 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 OR4F3Q6IEY1 312 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 OGFOD2Q6N063 350 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 RPUSD3Q6P087 351 aaKnown RBP9.47□□□□□ -0.89
HDAC6-222ENST00000478095 RTL4Q6ZR62 310 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 SPATA19Q7Z5L4 167 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 SULF2Q8IWU5 870 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 GPALPP1Q8IXQ4 340 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 LRRC34Q8IZ02 419 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 TAGAPQ8N103 731 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 OR2L13Q8N349 312 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 PSD4Q8NDX1 1056 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 OR10G3Q8NGC4 313 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 FBXO30Q8TB52 745 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 TP53INP1Q96A56 240 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 MIB2Q96AX9 1013 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 COQ8BQ96D53 544 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 ERP27Q96DN0 273 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 SPACA9Q96E40 222 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-222ENST00000478095 TEX37Q96LM6 180 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 VSTM2LQ96N03 204 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 PRPF18Q99633 342 aaKnown RBP9.47□□□□□ -0.89
HDAC6-222ENST00000478095 EBF4Q9BQW3 602 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 DUSP26Q9BV47 211 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 TSPAN10Q9H1Z9 355 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-222ENST00000478095 FOLH1BQ9HBA9 442 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 MED4Q9NPJ6 270 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 TIMMDC1Q9NPL8 285 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 DEPPQ9NTK1 212 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 ACSS1Q9NUB1 689 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-222ENST00000478095 ATAD3AQ9NVI7 634 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 TAS2R9Q9NYW1 312 aa9.47□□□□□ -0.89
HDAC6-222ENST00000478095 C19orf53Q9UNZ5 99 aaPredicted RBP9.47□□□□□ -0.89
HDAC6-222ENST00000478095 A0A087WV62 115 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 PINLYPA6NC86 204 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 FRG2CA6NGY1 282 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 E9PBE3 544 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 J3QKU1 62 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 PLOD2O00469 737 aa9.46□□□□□ -0.9
HDAC6-222ENST00000478095 ANKRD28O15084 1053 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms