RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 AP3D1O14617 1153 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 TOX3O15405 576 aaPredicted RBP4.12□□□□□ -1.75
VPS50-214ENST00000477935 NDUFS4O43181 175 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 CTDNEP1O95476 244 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 CGAP01215 116 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 IGHEP01854 428 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 HOXC4P09017 264 aaPredicted RBP4.12□□□□□ -1.75
VPS50-214ENST00000477935 ERVK-10P10266 1014 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 PDGFRAP16234 1089 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 GNAZP19086 355 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 NMBRP28336 390 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 SUOXP51687 545 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 DRG2P55039 364 aaKnown RBP4.12□□□□□ -1.75
VPS50-214ENST00000477935 SNRPFP62306 86 aaKnown RBP4.12□□□□□ -1.75
VPS50-214ENST00000477935 INCA1Q0VD86 236 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 IRF3Q14653 427 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 PSMD6Q15008 389 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 IL17AQ16552 155 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 SNRNP35Q16560 246 aaKnown RBP4.12□□□□□ -1.75
VPS50-214ENST00000477935 NKAIN2Q5VXU1 208 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 STXBP4Q6ZWJ1 553 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 PIGZQ86VD9 579 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 VPS36Q86VN1 386 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 CBWD2Q8IUF1 395 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 SCML4Q8N228 414 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 WDSUB1Q8N9V3 476 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 ACBD4Q8NC06 268 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 TRIM58Q8NG06 486 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 OR10G6Q8NH81 332 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 TAS1R2Q8TE23 839 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 SENP5Q96HI0 755 aaPredicted RBP4.12□□□□□ -1.75
VPS50-214ENST00000477935 PRICKLE1Q96MT3 831 aaPredicted RBP4.12□□□□□ -1.75
VPS50-214ENST00000477935 PLIN2Q99541 437 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 TREX2Q9BQ50 279 aaPredicted RBP4.12□□□□□ -1.75
VPS50-214ENST00000477935 APOOQ9BUR5 198 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 GSDMCQ9BYG8 508 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 ACTL8Q9H568 366 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 CYP3A43Q9HB55 503 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 APMAPQ9HDC9 416 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 SLC52A3Q9NQ40 469 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 OLFML3Q9NRN5 406 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 TBC1D7Q9P0N9 293 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 TBC1D29Q9UFV1 150 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 SLC12A6Q9UHW9 1150 aa4.12□□□□□ -1.75
VPS50-214ENST00000477935 FARSAQ9Y285 508 aaKnown RBP4.12□□□□□ -1.75
VPS50-214ENST00000477935 CNTRLQ7Z7A1 2325 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 TLN2Q9Y4G6 2542 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 A0A0U1RQS6 177 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 A6NL46 340 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 DUXAA6NLW8 204 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 AGAP14A8MT82 685 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 RNF212BA8MTL3 300 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 F5H5T6 163 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 CACNB4O00305 520 aaPredicted RBP4.11□□□□□ -1.75
VPS50-214ENST00000477935 CCL21O00585 134 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 E2F3O00716 465 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 GPR137BO60478 399 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 MITFO75030 526 aaPredicted RBP4.11□□□□□ -1.75
VPS50-214ENST00000477935 GFPT2O94808 682 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 FGF1P05230 155 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 PLEKP08567 350 aaPredicted RBP4.11□□□□□ -1.75
VPS50-214ENST00000477935 ANKRD34CP0C6C1 535 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 PRSS56P0CW18 603 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 IGHV4-38-2P0DP08 117 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 CCNB1P14635 433 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 CBLP22681 906 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 TSFMP43897 325 aaKnown RBP4.11□□□□□ -1.75
VPS50-214ENST00000477935 CSNK1G2P78368 415 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 OTUD4Q01804 1114 aaKnown RBP4.11□□□□□ -1.75
VPS50-214ENST00000477935 CHAF1BQ13112 559 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 AIMP2Q13155 320 aaKnown RBP4.11□□□□□ -1.75
VPS50-214ENST00000477935 MFAP5Q13361 173 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 RABGAP1LQ5R372 815 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 CES4AQ5XG92 561 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 ITPRIPL1Q6GPH6 555 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 KLC3Q6P597 504 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 Q71RC1 249 aaPredicted RBP4.11□□□□□ -1.75
VPS50-214ENST00000477935 CAMKMTQ7Z624 323 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 LGI2Q8N0V4 545 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 CCAR2Q8N163 923 aaKnown RBP4.11□□□□□ -1.75
VPS50-214ENST00000477935 SIX6OS1Q8N1H7 587 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 BCORP1Q8N888 145 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 OR2T12Q8NG77 320 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 OR56A4Q8NGH8 313 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 CXorf40AQ8TE69 158 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 GRHL3Q8TE85 626 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 CT55Q8WUE5 264 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 TMEM158Q8WZ71 300 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 IRGQQ8WZA9 623 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 RAD54LQ92698 747 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 BTN2A3PQ96KV6 586 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 ZNF582Q96NG8 517 aaPredicted RBP4.11□□□□□ -1.75
VPS50-214ENST00000477935 SERPINB11Q96P15 392 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 IP6K3Q96PC2 410 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 SECISBP2Q96T21 854 aaKnown RBP4.11□□□□□ -1.75
VPS50-214ENST00000477935 ULBP1Q9BZM6 244 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 SDCBP2Q9H190 292 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 SLA2Q9H6Q3 261 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 FGF21Q9NSA1 209 aa4.11□□□□□ -1.75
VPS50-214ENST00000477935 PDRG1Q9NUG6 133 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms