RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 RDH11Q8TC12 318 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 PGM2Q96G03 612 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 WDR41Q9HAD4 459 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 CD274Q9NZQ7 290 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 KLRF1Q9NZS2 232 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 DTX4Q9Y2E6 619 aa18.31■□□□□ 0.52
PDLIM1-202ENST00000477757 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 C2orf72A6NCS6 295 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 SLC22A20A6NK97 555 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 TMPRSS11DO60235 418 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 EEDO75530 441 aaKnown RBP18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 TP53P04637 393 aaPredicted RBP18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 CNTFP26441 200 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 SRD5A2P31213 254 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 PIK3CBP42338 1070 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 KIR2DL2P43627 348 aaPredicted RBP18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 MGAT5Q09328 741 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 VEZF1Q14119 521 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 NNATQ16517 81 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 BEX5Q5H9J7 111 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 HP1BP3Q5SSJ5 553 aaPredicted RBP18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 DESI1Q6ICB0 168 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 ZNF662Q6ZS27 426 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 NUP54Q7Z3B4 507 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 SPATA6LQ8N4H0 392 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 OR7G1Q8NGA0 311 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 MS4A14Q96JA4 679 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 SFXN2Q96NB2 322 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 MCMBPQ9BTE3 642 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 CD244Q9BZW8 370 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 RHOJQ9H4E5 214 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 HEY2Q9UBP5 337 aa18.3■□□□□ 0.52
PDLIM1-202ENST00000477757 CR1P17927 2039 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 A0A087X1B8 175 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 PRAMEF25A6NGN4 478 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 PHF1O43189 567 aaPredicted RBP18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 CD5LO43866 347 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 CGAP01215 116 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 FAM58BPP0C7Q3 252 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 GMPRP36959 345 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 KCNJ5P48544 419 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 PPP1R7Q15435 360 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 ETFDHQ16134 617 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 CLEC12BQ2HXU8 276 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 GRHL2Q6ISB3 625 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 ZNF611Q8N823 705 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 OMA1Q96E52 524 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 ZNF845Q96IR2 970 aaPredicted RBP18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 DDX31Q9H8H2 851 aaKnown RBP18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 PSD3Q9NYI0 1048 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 ASIC3Q9UHC3 531 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 TSC22D4Q9Y3Q8 395 aa18.29■□□□□ 0.52
PDLIM1-202ENST00000477757 HS3ST1O14792 307 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 EMC8O43402 210 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 CD8BP10966 210 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 CD1DP15813 335 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 BSGP35613 385 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 SLC12A2P55011 1212 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 ATP6V0D1P61421 351 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 SIRPAP78324 504 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 PLCXD2Q0VAA5 305 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 BCL2A1Q16548 175 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 C6orf163Q5TEZ5 329 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 SH2D5Q6ZV89 423 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 PLCZ1Q86YW0 608 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 PDIK1LQ8N165 341 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 LRRC39Q96DD0 335 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 DTNBP1Q96EV8 351 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 NAP1L3Q99457 506 aaPredicted RBP18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 MTERF1Q99551 399 aaKnown RBP18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 REG4Q9BYZ8 158 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 TEX264Q9Y6I9 313 aa18.28■□□□□ 0.52
PDLIM1-202ENST00000477757 ACOX3O15254 700 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 KLF4O43474 513 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 UGT2B11O75310 529 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 S100BP04271 92 aaPredicted RBP18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 THBDP07204 575 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 CCDC166P0CW27 439 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 S1PR1P21453 382 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 PIK3R1P27986 724 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 POU4F1Q01851 419 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 FGFBP1Q14512 234 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 CYP20A1Q6UW02 462 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 TMEM204Q9BSN7 226 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 ITPAQ9BY32 194 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 YAE1D1Q9NRH1 226 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 FBXL2Q9UKC9 423 aa18.27■□□□□ 0.52
PDLIM1-202ENST00000477757 FRG2CA6NGY1 282 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 PGRMC1O00264 195 aaKnown RBP18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 PGRMC2O15173 223 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 HMGCS1Q01581 520 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 ILF2Q12905 390 aaKnown RBP18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 CHRFAM7AQ494W8 412 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 C10orf62Q5T681 223 aaPredicted RBP18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 CHMP1BQ7LBR1 199 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 MILR1Q7Z6M3 343 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 NUDT13Q86X67 352 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 UBTD2Q8WUN7 234 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 FIG4Q92562 907 aa18.26■□□□□ 0.51
PDLIM1-202ENST00000477757 EXT2Q93063 718 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms