RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 U3KQV3 271 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 DSPPQ9NZW4 1301 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 DOCK9Q9BZ29 2069 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 MYO10Q9HD67 2058 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 HEATR5BQ9P2D3 2071 aa7.45□□□□□ -1.22
VMA21-203ENST00000477649 XIRP2A4UGR9 3374 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 E9PQ18 207 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 ZNF749O43361 778 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 PRAMEF10O60809 474 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 OPN1SWP03999 348 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 ALPPP05187 535 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 H1F0P07305 194 aaKnown RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 GNAO1P09471 354 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 ALOX5P09917 674 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 PVRP15151 417 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 ATP6V1B1P15313 513 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 JUNBP17275 347 aaPredicted RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 CRHBPP24387 322 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 CNR2P34972 360 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 CTSKP43235 329 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 PRKAG1P54619 331 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 HSD17B7P56937 341 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 ISL1P61371 349 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 RPS26P62854 115 aaKnown RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 HSD11B2P80365 405 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 IGLV3-21P80748 117 aaPredicted RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 MVKQ03426 396 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 MAP4K2Q12851 820 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 NPRL3Q12980 569 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 LARS2Q15031 903 aaKnown RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 ZNHIT3Q15649 155 aaPredicted RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 MAPK11Q15759 364 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 GPR19Q15760 415 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 DUSP7Q16829 419 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 ARHGAP11BQ3KRB8 267 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 ZIK1Q3SY52 487 aaPredicted RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 ZBED5Q49AG3 693 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 GPAT3Q53EU6 434 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 EXOSC6Q5RKV6 272 aaKnown RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 DCST1Q5T197 706 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 MLIPQ5VWP3 458 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 WDR74Q6RFH5 385 aaPredicted RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 CEP68Q76N32 757 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 PRSS42Q7Z5A4 293 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 PEX5LQ8IYB4 626 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 CHDHQ8NE62 594 aaPredicted RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 ZNF420Q8TAQ5 688 aaPredicted RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 IPCEF1Q8WWN9 437 aaPredicted RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 HOXB13Q92826 284 aaPredicted RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 RAB8BQ92930 207 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 SLC35B4Q969S0 331 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 CTHRC1Q96CG8 243 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 GIMAP5Q96F15 307 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 HRASLS5Q96KN8 279 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 PRRC1Q96M27 445 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 ALPK1Q96QP1 1244 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 ELF4Q99607 663 aaPredicted RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 AMBRA1Q9C0C7 1298 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 SERHL2Q9H4I8 314 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 SYNPO2LQ9H987 977 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 PRMT8Q9NR22 394 aaPredicted RBP7.44□□□□□ -1.22
VMA21-203ENST00000477649 VNN3Q9NY84 501 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 NLGN3Q9NZ94 848 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 LRIT1Q9P2V4 623 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 TESMINQ9Y4I5 508 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 MMACHCQ9Y4U1 282 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 COMMD3-BMI1R4GMX3 469 aa7.44□□□□□ -1.22
VMA21-203ENST00000477649 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 EIF4E1BA6NMX2 242 aaKnown RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 CHST10O43529 356 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 DYRK3O43781 588 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 OR10H2O60403 315 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 STX11O75558 287 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 UGT2B17O75795 530 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 STATHP02808 62 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 DBIP07108 87 aaKnown RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 C8orf89P0DMQ9 161 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 GSTM3P21266 225 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 NT5EP21589 574 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 BCKDHBP21953 392 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 PRKACGP22612 351 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 CBLP22681 906 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 MAOBP27338 520 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 GABRA4P48169 554 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 CSNK1EP49674 416 aaKnown RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 ARL4DP49703 201 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 PSMD4P55036 377 aaKnown RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 CASP9P55211 416 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 CDH12P55289 794 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 PSPHP78330 225 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 SIM1P81133 766 aaPredicted RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 SHC2P98077 582 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 ZXDAP98168 799 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 IL5RAQ01344 420 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 ALDH6A1Q02252 535 aaKnown RBP7.43□□□□□ -1.22
VMA21-203ENST00000477649 CD47Q08722 323 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 SIGLEC14Q08ET2 396 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 DUSP8Q13202 625 aa7.43□□□□□ -1.22
VMA21-203ENST00000477649 PUM1Q14671 1186 aaKnown RBP eCLIP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms