RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ZC3H12DA2A288 527 aaKnown RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 GUCY1B2O75343 617 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 SEC31AO94979 1220 aaKnown RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 CRABP2P29373 138 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 UQCRC1P31930 480 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 PIK3CBP42338 1070 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 DGKQP52824 942 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 KRTAP10-9P60411 292 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 RAB10P61026 200 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 CAV1Q03135 178 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 TFF3Q07654 80 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 ASPHQ12797 758 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 NAB1Q13506 487 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 C10orf62Q5T681 223 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 KHDRBS2Q5VWX1 349 aaKnown RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 LIPJQ5W064 366 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 KLC3Q6P597 504 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 GPR180Q86V85 440 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 LACC1Q8IV20 430 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 IGDCC3Q8IVU1 814 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 AMER2Q8N7J2 671 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 NEIL3Q8TAT5 605 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 PAQR8Q8TEZ7 354 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 FBXL20Q96IG2 436 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 JSRP1Q96MG2 331 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 F2RL3Q96RI0 385 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 SECISBP2Q96T21 854 aaKnown RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 YIPF4Q9BSR8 244 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 DOHHQ9BU89 302 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 MS4A8Q9BY19 250 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 TUBA8Q9NY65 449 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 AHSPQ9NZD4 102 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 ZNF629Q9UEG4 869 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 PTBP2Q9UKA9 531 aaKnown RBP6.68□□□□□ -1.34
BRCA1-214ENST00000477152 SAR1BQ9Y6B6 198 aa6.68□□□□□ -1.34
BRCA1-214ENST00000477152 EML6Q6ZMW3 1958 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 SUPT3HB4E1H0 165 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 E7ESA3 106 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 K7EPI3 171 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 SYT5O00445 386 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 ZNHIT1O43257 154 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 UGDHO60701 494 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 LDB3O75112 727 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 SUPT3HO75486 399 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 SCELO95171 688 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 CD1DP15813 335 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 GDF1P27539 372 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 STX2P32856 288 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 OPRM1P35372 400 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 DNASE1L1P49184 302 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 TNFRSF17Q02223 184 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 RCAN2Q14206 197 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 FLYWCH1Q4VC44 716 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 EMC4Q5J8M3 183 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 DEPDC1Q5TB30 811 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 GRHL2Q6ISB3 625 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 METTL2BQ6P1Q9 378 aaKnown RBP6.67□□□□□ -1.34
BRCA1-214ENST00000477152 TGIF2LYQ8IUE0 185 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 CTAGE3PQ8IX95 158 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 LAS2Q8IYD9 372 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 ZCCHC7Q8N3Z6 543 aaKnown RBP6.67□□□□□ -1.34
BRCA1-214ENST00000477152 UHMK1Q8TAS1 419 aaKnown RBP6.67□□□□□ -1.34
BRCA1-214ENST00000477152 ZNF721Q8TF20 911 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 ZNF473Q8WTR7 871 aaKnown RBP6.67□□□□□ -1.34
BRCA1-214ENST00000477152 ANKRD49Q8WVL7 239 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 RIT1Q92963 219 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 RNASE6Q93091 150 aaKnown RBP6.67□□□□□ -1.34
BRCA1-214ENST00000477152 CAPZA3Q96KX2 299 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 CSF3RQ99062 836 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 RBBP8Q99708 897 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 MAPKAP1Q9BPZ7 522 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 CNPPD1Q9BV87 410 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 LIN28AQ9H9Z2 209 aaKnown RBP6.67□□□□□ -1.34
BRCA1-214ENST00000477152 PSD3Q9NYI0 1048 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 SLC17A6Q9P2U8 582 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 ST6GALNAC2Q9UJ37 374 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 ZNF490Q9ULM2 529 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-214ENST00000477152 TMCO1Q9UM00 188 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 TSC22D4Q9Y3Q8 395 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 IKBKGQ9Y6K9 419 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 TEP1Q99973 2627 aaKnown RBP6.67□□□□□ -1.34
BRCA1-214ENST00000477152 DNAJC13O75165 2243 aa6.67□□□□□ -1.34
BRCA1-214ENST00000477152 F8P00451 2351 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 C15orf38-AP3S2A0A0A6YYH1 394 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 A0A0G2JNJ9 132 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 C2orf92A0A1B0GVN3 265 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 TMEM200CA6NKL6 621 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 FAM171A2A8MVW0 826 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 C4orf51C9J302 202 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 G3V3Y1 287 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 TAPBPO15533 448 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 PRKNO60260 465 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 CTAG2O75638 210 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 TRAPPC6AO75865 159 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 GPR75O95800 540 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 EPPINO95925 133 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 LTA4HP09960 611 aaKnown RBP6.66□□□□□ -1.34
BRCA1-214ENST00000477152 IVDP26440 423 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 PIK3R1P27986 724 aa6.66□□□□□ -1.34
BRCA1-214ENST00000477152 TIMP3P35625 211 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms