RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 AGXTP21549 392 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 ELAVL4P26378 380 aaKnown RBP20.41■□□□□ 0.86
CCM2-206ENST00000474617 EMP3P54852 163 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 NXPH1P58417 271 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 ALDH6A1Q02252 535 aaKnown RBP20.41■□□□□ 0.86
CCM2-206ENST00000474617 FUT5Q11128 374 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 BIKQ13323 160 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 C1orf61Q13536 156 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 PRTGQ2VWP7 1150 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 ARHGAP11BQ3KRB8 267 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 EIPR1Q53HC9 387 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 GTF2IRD2BQ6EKJ0 949 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 GPR153Q6NV75 609 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 GTF2IRD2Q86UP8 949 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 UBALD2Q8IYN6 164 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 ENTHD1Q8IYW4 607 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 CA13Q8N1Q1 262 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 CDRT4Q8N9R6 151 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 MYDGFQ969H8 173 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 SLC38A3Q99624 504 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 FNDC11Q9BVV2 318 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 UCK2Q9BZX2 261 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 SLC38A1Q9H2H9 487 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 IMPAD1Q9NX62 359 aa20.41■□□□□ 0.86
CCM2-206ENST00000474617 ENO4A6NNW6 628 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 FAM20BO75063 409 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 WNT1P04628 370 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 THBS1P07996 1170 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 OSMP13725 252 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 PVRP15151 417 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 VSX2P58304 361 aaPredicted RBP20.4■□□□□ 0.86
CCM2-206ENST00000474617 RPL6Q02878 288 aaKnown RBP20.4■□□□□ 0.86
CCM2-206ENST00000474617 ILKQ13418 452 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 FAM53BQ14153 422 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 GANABQ14697 944 aaKnown RBP20.4■□□□□ 0.86
CCM2-206ENST00000474617 ZNF750Q32MQ0 723 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 ZNF311Q5JNZ3 666 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 FGD3Q5JSP0 725 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 TCTE1Q5JU00 501 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 EXOSC6Q5RKV6 272 aaKnown RBP20.4■□□□□ 0.86
CCM2-206ENST00000474617 AP1ARQ63HQ0 302 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 DEF8Q6ZN54 512 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 MCATQ8IVS2 390 aaKnown RBP20.4■□□□□ 0.86
CCM2-206ENST00000474617 DNAJC22Q8N4W6 341 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 OR7G2Q8NG99 324 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 LMX1AQ8TE12 382 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 TRUB1Q8WWH5 349 aaKnown RBP20.4■□□□□ 0.86
CCM2-206ENST00000474617 ZNF285Q96NJ3 590 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 ARHGDIGQ99819 225 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 FUZQ9BT04 418 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 PIGUQ9H490 435 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 C2orf42Q9NWW7 574 aa20.4■□□□□ 0.86
CCM2-206ENST00000474617 SZT2Q5T011 3432 aa20.39■□□□□ 0.86
CCM2-206ENST00000474617 HYKKA2RU49 373 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 AQP9O43315 295 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 COQ9O75208 318 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 SLC35E2P0CK97 266 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 GSTM3P21266 225 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 CRISP1P54107 249 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 CWF19L1Q69YN2 538 aaKnown RBP20.39■□□□□ 0.85
CCM2-206ENST00000474617 FAM160A2Q8N612 972 aaPredicted RBP20.39■□□□□ 0.85
CCM2-206ENST00000474617 ZNF540Q8NDQ6 660 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 FAM81AQ8TBF8 368 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 RORBQ92753 470 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 C16orf58Q96GQ5 468 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 CSF3RQ99062 836 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 NIPSNAP1Q9BPW8 284 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 ENAMQ9NRM1 1142 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 NDOR1Q9UHB4 597 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 A4GNTQ9UNA3 340 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 XIRP2A4UGR9 3374 aa20.39■□□□□ 0.85
CCM2-206ENST00000474617 SH3PXD2BA1X283 911 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 ZAR1LA6NP61 321 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 ZNF99A8MXY4 864 aaPredicted RBP20.38■□□□□ 0.85
CCM2-206ENST00000474617 PTGES3LE9PB15 166 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 PCDHGA12O60330 932 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 HTR1AP08908 422 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 ST6GAL1P15907 406 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 PCMT1P22061 227 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 SIM1P81133 766 aaPredicted RBP20.38■□□□□ 0.85
CCM2-206ENST00000474617 LARS2Q15031 903 aaKnown RBP20.38■□□□□ 0.85
CCM2-206ENST00000474617 NPTX1Q15818 432 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 WDR45BQ5MNZ6 344 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 FHL5Q5TD97 284 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 PEX5LQ8IYB4 626 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 ARHGEF39Q8N4T4 335 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 OR9Q2Q8NGE9 314 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 DNASE2BQ8WZ79 361 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 KAT2AQ92830 837 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 C12orf43Q96C57 262 aaKnown RBP20.38■□□□□ 0.85
CCM2-206ENST00000474617 ZDHHC12Q96GR4 267 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 ZNF578Q96N58 590 aaPredicted RBP20.38■□□□□ 0.85
CCM2-206ENST00000474617 ARMC7Q9H6L4 198 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 GPN2Q9H9Y4 310 aaPredicted RBP20.38■□□□□ 0.85
CCM2-206ENST00000474617 RLIMQ9NVW2 624 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 PLCL2Q9UPR0 1127 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 RNF6Q9Y252 685 aa20.38■□□□□ 0.85
CCM2-206ENST00000474617 TLCD2A6NGC4 264 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 TTC36A6NLP5 189 aa20.37■□□□□ 0.85
CCM2-206ENST00000474617 OR10H3O60404 316 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms