RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 CCDC116Q8IYX3 515 aa18.82■□□□□ 0.6
SNX13-206ENST00000474067 DOK4Q8TEW6 326 aa18.82■□□□□ 0.6
SNX13-206ENST00000474067 MARVELD3Q96A59 401 aa18.82■□□□□ 0.6
SNX13-206ENST00000474067 C11orf24Q96F05 449 aaPredicted RBP18.82■□□□□ 0.6
SNX13-206ENST00000474067 TMEM41AQ96HV5 264 aa18.82■□□□□ 0.6
SNX13-206ENST00000474067 ANGPTL4Q9BY76 406 aa18.82■□□□□ 0.6
SNX13-206ENST00000474067 SLC24A3Q9HC58 644 aa18.82■□□□□ 0.6
SNX13-206ENST00000474067 TAS2R7Q9NYW3 318 aa18.82■□□□□ 0.6
SNX13-206ENST00000474067 MRTO4Q9UKD2 239 aaKnown RBP18.82■□□□□ 0.6
SNX13-206ENST00000474067 A0A0G2JMM0 328 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 A0A1W2PPB8 328 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 A0A1W2PRS3 328 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 KIR3DP1A8MWS1 328 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 UBFD1O14562 309 aaKnown RBP18.81■□□□□ 0.6
SNX13-206ENST00000474067 TO15178 435 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 NPHS1O60500 1241 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 PLOD3O60568 738 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 SEC22BO75396 215 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 WISP2O76076 250 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 IFI6P09912 130 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 S1PR1P21453 382 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 ACVR2AP27037 513 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 GDF1P27539 372 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 RAE1P78406 368 aaKnown RBP18.81■□□□□ 0.6
SNX13-206ENST00000474067 EFR3AQ14156 821 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 ZNF628Q5EBL2 1059 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 HIST2H2BCQ6DN03 193 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 FAM111BQ6SJ93 734 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 FGD2Q7Z6J4 655 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 C10orf107Q8IVU9 208 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 PM20D2Q8IYS1 436 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 BANPQ8N9N5 519 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 CDC26Q8NHZ8 85 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 AENQ8WTP8 325 aaKnown RBP18.81■□□□□ 0.6
SNX13-206ENST00000474067 SDCCAG3Q96C92 435 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 RILPQ96NA2 401 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 CCT7Q99832 543 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 EBPLQ9BY08 206 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 ITPAQ9BY32 194 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 NXF5Q9H1B4 397 aaKnown RBP18.81■□□□□ 0.6
SNX13-206ENST00000474067 C1orf109Q9NX04 203 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 HEY2Q9UBP5 337 aa18.81■□□□□ 0.6
SNX13-206ENST00000474067 A0A1W2PS29 197 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 TTC36A6NLP5 189 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 CBX7O95931 251 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 MAPK1P28482 360 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 CASP3P42574 277 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 FOXA1P55317 472 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 FBXW4P57775 412 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 MGAT2Q10469 447 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 PCLAFQ15004 111 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 EXOSC7Q15024 291 aaKnown RBP18.8■□□□□ 0.6
SNX13-206ENST00000474067 ZNHIT3Q15649 155 aaPredicted RBP18.8■□□□□ 0.6
SNX13-206ENST00000474067 TRMT12Q53H54 448 aaKnown RBP18.8■□□□□ 0.6
SNX13-206ENST00000474067 NOXRED1Q6NXP6 359 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 SCIMPQ6UWF3 145 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 B3GNT6Q6ZMB0 384 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 KIRREL3Q8IZU9 778 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 ADCY4Q8NFM4 1077 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 ZFP28Q8NHY6 868 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 NEIL3Q8TAT5 605 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 OMA1Q96E52 524 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 LRTM1Q9HBL6 345 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 HHATLQ9HCP6 504 aa18.8■□□□□ 0.6
SNX13-206ENST00000474067 A0A087WV62 115 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 OR6C70A6NIJ9 312 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 CYSRT1A8MQ03 144 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 TRIM3O75382 744 aaPredicted RBP18.79■□□□□ 0.6
SNX13-206ENST00000474067 SNUPNO95149 360 aaKnown RBP18.79■□□□□ 0.6
SNX13-206ENST00000474067 ABCB1P08183 1280 aaPredicted RBP18.79■□□□□ 0.6
SNX13-206ENST00000474067 PCSK2P16519 638 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 IL12BP29460 328 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 RPL3P39023 403 aaKnown RBP18.79■□□□□ 0.6
SNX13-206ENST00000474067 ZNF585AQ6P3V2 769 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 C3P1Q6ZMU1 363 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 GDF7Q7Z4P5 450 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 TICAM1Q8IUC6 712 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 CLYBLQ8N0X4 340 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 MREGQ8N565 214 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 OR1J4Q8NGS1 313 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 ZNF764Q96H86 408 aaPredicted RBP18.79■□□□□ 0.6
SNX13-206ENST00000474067 BTBD9Q96Q07 612 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 TMEM109Q9BVC6 243 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 OSBPL11Q9BXB4 747 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 KLRF1Q9NZS2 232 aa18.79■□□□□ 0.6
SNX13-206ENST00000474067 GPR55Q9Y2T6 319 aaPredicted RBP18.79■□□□□ 0.6
SNX13-206ENST00000474067 POLR3HQ9Y535 204 aaPredicted RBP18.79■□□□□ 0.6
SNX13-206ENST00000474067 TMEM114B3SHH9 223 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 ADAM10O14672 748 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 ERN1O75460 977 aaKnown RBP18.78■□□□□ 0.6
SNX13-206ENST00000474067 FGF4P08620 206 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 ASMTP46597 345 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 EMDP50402 254 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 NCBP2P52298 156 aaKnown RBP eCLIP18.78■□□□□ 0.6
SNX13-206ENST00000474067 PSMD4P55036 377 aaKnown RBP18.78■□□□□ 0.6
SNX13-206ENST00000474067 MRPS35P82673 323 aaKnown RBP18.78■□□□□ 0.6
SNX13-206ENST00000474067 LTB4RQ15722 352 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 FAM71E1Q6IPT2 247 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 MMP21Q8N119 569 aa18.78■□□□□ 0.6
SNX13-206ENST00000474067 OR9A2Q8NGT5 310 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms