RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 ERN1O75460 977 aaKnown RBP8.7□□□□□ -1.02
MCF2L-223ENST00000473345 PPM1BO75688 479 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 SOX30O94993 753 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 GOSR1O95249 250 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 CNOT4O95628 575 aaKnown RBP8.7□□□□□ -1.02
MCF2L-223ENST00000473345 CBX7O95931 251 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 NR2F6P10588 404 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 CYP4B1P13584 511 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 ZNF708P17019 499 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 CRYGSP22914 178 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 GALNSP34059 522 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 PTH2RP49190 550 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 GAS1P54826 345 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 GPX6P59796 221 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 POU4F1Q01851 419 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 TBL3Q12788 808 aaKnown RBP8.7□□□□□ -1.02
MCF2L-223ENST00000473345 CBLBQ13191 982 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 LAPTM5Q13571 262 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 LTB4RQ15722 352 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 PAGE2BQ5JRK9 111 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 TBCELQ5QJ74 424 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 UBAP2Q5T6F2 1119 aaKnown RBP8.7□□□□□ -1.02
MCF2L-223ENST00000473345 ANKRD34AQ69YU3 496 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 OR5M10Q6IEU7 315 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 PRSS57Q6UWY2 283 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 PACS2Q86VP3 889 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 MED12LQ86YW9 2145 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 CENPLQ8N0S6 344 aaPredicted RBP8.7□□□□□ -1.02
MCF2L-223ENST00000473345 TAGAPQ8N103 731 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 PDIK1LQ8N165 341 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 TEX9Q8N6V9 391 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 SRFBP1Q8NEF9 429 aaKnown RBP8.7□□□□□ -1.02
MCF2L-223ENST00000473345 OR1J4Q8NGS1 313 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 WDR20Q8TBZ3 569 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 GRK7Q8WTQ7 553 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 RNF138Q8WVD3 245 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 FIG4Q92562 907 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 WNT2BQ93097 391 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 RGMAQ96B86 450 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 OMA1Q96E52 524 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 LRRC46Q96FV0 321 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 SECISBP2Q96T21 854 aaKnown RBP8.7□□□□□ -1.02
MCF2L-223ENST00000473345 RBBP8Q99708 897 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 CCL19Q99731 98 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 PARD6BQ9BYG5 372 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 RTN4RQ9BZR6 473 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 TRIM31Q9BZY9 425 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 SNX15Q9NRS6 342 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 RYDENQ9NUL5 291 aaKnown RBP8.7□□□□□ -1.02
MCF2L-223ENST00000473345 MAT2BQ9NZL9 334 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 PHF11Q9UIL8 331 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 CES1P1Q9UKY3 287 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 RNF112Q9ULX5 631 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 RNF11Q9Y3C5 154 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 COL6A5A8TX70 2615 aa8.7□□□□□ -1.02
MCF2L-223ENST00000473345 A0A087X1B8 175 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 HMX2A2RU54 273 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 H0Y3Z8 333 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 TP53I11O14683 189 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 ARHGEF9O43307 516 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 KLF4O43474 513 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 CRLF1O75462 422 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 ACTL6AO96019 429 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 RHOXF2BP0C7M4 288 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 H2AFXP16104 143 aaPredicted RBP8.69□□□□□ -1.02
MCF2L-223ENST00000473345 MC3RP41968 323 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 PIK3CBP42338 1070 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 CPA2P48052 419 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 RAP1GDS1P52306 607 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 SUCLG1P53597 346 aaKnown RBP8.69□□□□□ -1.02
MCF2L-223ENST00000473345 DR1Q01658 176 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 SETDB1Q15047 1291 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 HIST2H2ACQ16777 129 aaPredicted RBP8.69□□□□□ -1.02
MCF2L-223ENST00000473345 PRICKLE4Q2TBC4 344 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 TRMT12Q53H54 448 aaKnown RBP8.69□□□□□ -1.02
MCF2L-223ENST00000473345 HIST2H2AA3Q6FI13 130 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 TMEM81Q6P7N7 255 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 NPSR1Q6W5P4 371 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 GALNT12Q8IXK2 581 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 C7orf57Q8NEG2 295 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 ADCY4Q8NFM4 1077 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 NXNL1Q96CM4 212 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 LRRC39Q96DD0 335 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 ZC3HAV1LQ96H79 300 aaKnown RBP8.69□□□□□ -1.02
MCF2L-223ENST00000473345 CDK15Q96Q40 435 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 RHOXF2Q9BQY4 288 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 ERP44Q9BS26 406 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 OSBPL11Q9BXB4 747 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 GSX2Q9BZM3 304 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 CNOT10Q9H9A5 744 aaKnown RBP8.69□□□□□ -1.02
MCF2L-223ENST00000473345 MS4A12Q9NXJ0 267 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 FLRT3Q9NZU0 649 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 PACSIN3Q9UKS6 424 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 EXO1Q9UQ84 846 aaKnown RBP8.69□□□□□ -1.02
MCF2L-223ENST00000473345 PLLPQ9Y342 182 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 TSC22D4Q9Y3Q8 395 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 SPACA6W5XKT8 324 aa8.69□□□□□ -1.02
MCF2L-223ENST00000473345 TCRBV9S1A1TA0A576 114 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 CCDC151A5D8V7 595 aa8.68□□□□□ -1.02
MCF2L-223ENST00000473345 FAM159BA6NKW6 160 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms