RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 AFTPHQ6ULP2 937 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 LIPIQ6XZB0 460 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 ZNF730Q6ZMV8 503 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 FAM92BQ6ZTR7 304 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 PAQR9Q6ZVX9 377 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 SCN4BQ8IWT1 228 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 C10orf111Q8N326 155 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 NANOGP1Q8N7R0 232 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 RTL3Q8N8U3 475 aaKnown RBP9.56□□□□□ -0.88
APTX-216ENST00000472896 DCBLD1Q8N8Z6 715 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 PHF21AQ96BD5 680 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 SCMH1Q96GD3 660 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 KCTD7Q96MP8 289 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 CDK15Q96Q40 435 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 SECISBP2Q96T21 854 aaKnown RBP9.56□□□□□ -0.88
APTX-216ENST00000472896 GPR21Q99679 349 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 DPCDQ9BVM2 203 aaPredicted RBP9.56□□□□□ -0.88
APTX-216ENST00000472896 ELOVL6Q9H5J4 265 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 SLC6A13Q9NSD5 602 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 TXNL4BQ9NX01 149 aaKnown RBP9.56□□□□□ -0.88
APTX-216ENST00000472896 BAIAP2Q9UQB8 552 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 ACTL7AQ9Y615 435 aa9.56□□□□□ -0.88
APTX-216ENST00000472896 HELZ2Q9BYK8 2649 aaKnown RBP9.56□□□□□ -0.88
APTX-216ENST00000472896 IGHV1OR15-9A0A0B4J2B8 117 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 GLYATL1P3A0A0U1RQE8 302 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 A0A1W2PPL8 197 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 MFSD2BA6NFX1 497 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 ZNF98A6NK75 572 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 ZAR1LA6NP61 321 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 J3KR12 359 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 CLIC1O00299 241 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 RFXANKO14593 260 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 ABCD4O14678 606 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 SUV39H1O43463 412 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 PLOD3O60568 738 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 SLC19A2O60779 497 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 BEST1O76090 585 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 AP2A2O94973 939 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 PAHP00439 452 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 LALBAP00709 142 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 APODP05090 189 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 PKMP14618 531 aaKnown RBP9.55□□□□□ -0.88
APTX-216ENST00000472896 PPIBP23284 216 aaKnown RBP9.55□□□□□ -0.88
APTX-216ENST00000472896 APEX1P27695 318 aaKnown RBP9.55□□□□□ -0.88
APTX-216ENST00000472896 WASP42768 502 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 TNFRSF4P43489 277 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 FGFBP1Q14512 234 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 TSC22D1Q15714 1073 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 FBXO48Q5FWF7 155 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 MARC1Q5VT66 337 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 CFAP77Q6ZQR2 320 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 PTCHD4Q6ZW05 846 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 TRILQ7L0X0 811 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 VTCN1Q7Z7D3 282 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 ADGRF3Q8IZF5 1079 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 UBE2J2Q8N2K1 259 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 SLC5A8Q8N695 610 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 TEX26Q8N6G2 289 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 KRTCAP2Q8N6L1 136 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 FAM46DQ8NEK8 389 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 OR6M1Q8NGM8 313 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 WDR48Q8TAF3 677 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.55□□□□□ -0.888e-6■□□□□ 10.5
APTX-216ENST00000472896 NUDT8Q8WV74 236 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 RBP7Q96R05 134 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 FAM129BQ96TA1 746 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 USB1Q9BQ65 265 aaKnown RBP9.55□□□□□ -0.88
APTX-216ENST00000472896 ACBD6Q9BR61 282 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 DOHHQ9BU89 302 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 REG4Q9BYZ8 158 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 SLC29A3Q9BZD2 475 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 RSPH9Q9H1X1 276 aaPredicted RBP9.55□□□□□ -0.88
APTX-216ENST00000472896 NT5MQ9NPB1 228 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 TAS2R16Q9NYV7 291 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 SCML1Q9UN30 329 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 CORO2BQ9UQ03 480 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 LIPT1Q9Y234 373 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 GSTK1Q9Y2Q3 226 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 MED16Q9Y2X0 877 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 RPL36Q9Y3U8 105 aaKnown RBP9.55□□□□□ -0.88
APTX-216ENST00000472896 PCDHB9Q9Y5E1 797 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 A0A0A6YYJ9 748 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 PRAMEF33A0A0G2JMD5 474 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 CLDN5O00501 218 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 CCL22O00626 93 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 LZTS3O60299 673 aaPredicted RBP9.55□□□□□ -0.88
APTX-216ENST00000472896 GMDSO60547 372 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 PRAMEF10O60809 474 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 ADAM11O75078 769 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 C1QL1O75973 258 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 PEX11BO96011 259 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 MMP2P08253 660 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 ACSM4P0C7M7 580 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 BCKDHAP12694 445 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 CPEP16870 476 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 PSMA3P25788 255 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 SLC6A1P30531 599 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 RECQLP46063 649 aaPredicted RBP9.55□□□□□ -0.88
APTX-216ENST00000472896 EVX1P49640 407 aa9.55□□□□□ -0.88
APTX-216ENST00000472896 STK19P49842 368 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms