RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 PTGER1P34995 402 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 CDK9P50750 372 aaKnown RBP18.49■□□□□ 0.55
SF1-213ENST00000472725 NRG3P56975 720 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 HBA1P69905 142 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 PHC1P78364 1004 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 KLRB1Q12918 225 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 RCAN2Q14206 197 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 TLR1Q15399 786 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 PAOXQ6QHF9 649 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 Q6ZS92 163 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 CPLX4Q7Z7G2 160 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 OR56A1Q8NGH5 318 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 TSPEARQ8WU66 669 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 NUDT8Q8WV74 236 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 C10orf82Q8WW14 230 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 SLC39A7Q92504 469 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 HOXB13Q92826 284 aaPredicted RBP18.49■□□□□ 0.55
SF1-213ENST00000472725 LCORQ96JN0 433 aaPredicted RBP18.49■□□□□ 0.55
SF1-213ENST00000472725 VSTM2LQ96N03 204 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 MS4A4EQ96PG1 132 aa18.49■□□□□ 0.55
SF1-213ENST00000472725 ZBTB20Q9HC78 741 aaPredicted RBP18.49■□□□□ 0.55
SF1-213ENST00000472725 GPR55Q9Y2T6 319 aaPredicted RBP18.49■□□□□ 0.55
SF1-213ENST00000472725 TRAV17A0A0B4J275 112 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 FRG2CA6NGY1 282 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 WWP2O00308 870 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 TO15178 435 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 MAN1A2O60476 641 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 DRD4P21917 467 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 ZFP36L2P47974 494 aaKnown RBP18.48■□□□□ 0.55
SF1-213ENST00000472725 CCT3P49368 545 aaKnown RBP18.48■□□□□ 0.55
SF1-213ENST00000472725 TMED10P49755 219 aaKnown RBP18.48■□□□□ 0.55
SF1-213ENST00000472725 TNFSF10P50591 281 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 SEC24CP53992 1094 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 KCNK10P57789 538 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 TUBA3CQ13748 450 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 ZNHIT3Q15649 155 aaPredicted RBP18.48■□□□□ 0.55
SF1-213ENST00000472725 VPS26BQ4G0F5 336 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 TUBA3EQ6PEY2 450 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 BLOC1S3Q6QNY0 202 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 SPATA21Q7Z572 469 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 TRIML2Q8N7C3 387 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 RBMXL3Q8N7X1 1067 aaKnown RBP18.48■□□□□ 0.55
SF1-213ENST00000472725 CDRT4Q8N9R6 151 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 TEX19Q8NA77 164 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 NUP43Q8NFH3 380 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 ASB15Q8WXK1 588 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 PNPLA2Q96AD5 504 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 FAM120BQ96EK7 910 aaKnown RBP18.48■□□□□ 0.55
SF1-213ENST00000472725 SGCZQ96LD1 299 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 FOLH1BQ9HBA9 442 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 GIN1Q9NXP7 522 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 B3GNT3Q9Y2A9 372 aa18.48■□□□□ 0.55
SF1-213ENST00000472725 NUP214P35658 2090 aaPredicted RBP18.48■□□□□ 0.55
SF1-213ENST00000472725 A8MVJ9 347 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 SLC22A2O15244 555 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 ERN1O75460 977 aaKnown RBP18.47■□□□□ 0.55
SF1-213ENST00000472725 NADKO95544 446 aaPredicted RBP18.47■□□□□ 0.55
SF1-213ENST00000472725 KRT16P08779 473 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 CD96P40200 585 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 PRIM2P49643 509 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 NR0B1P51843 470 aaKnown RBP18.47■□□□□ 0.55
SF1-213ENST00000472725 DGKQP52824 942 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 GOLM1Q8NBJ4 401 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 SIMC1Q8NDZ2 872 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 OR4A15Q8NGL6 344 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 OR9I1Q8NGQ6 314 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 LMF2Q9BU23 707 aaKnown RBP18.47■□□□□ 0.55
SF1-213ENST00000472725 ITPAQ9BY32 194 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 CXorf36Q9H7Y0 433 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 ZCCHC3Q9NUD5 404 aaKnown RBP18.47■□□□□ 0.55
SF1-213ENST00000472725 HPF1Q9NWY4 346 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 CCDC167Q9P0B6 97 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 LRFN1Q9P244 771 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 ANAPC2Q9UJX6 822 aa18.47■□□□□ 0.55
SF1-213ENST00000472725 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 CCDC154A6NI56 674 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 SNX3O60493 162 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 FBXO45P0C2W1 286 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 CT45A8P0DMV1 189 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 CT45A9P0DMV2 189 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 EFNA1P20827 205 aaPredicted RBP18.46■□□□□ 0.55
SF1-213ENST00000472725 UQCRC2P22695 453 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 TRPC1P48995 793 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 TXNL4AP83876 142 aaKnown RBP18.46■□□□□ 0.55
SF1-213ENST00000472725 OC90Q02509 493 aaPredicted RBP18.46■□□□□ 0.55
SF1-213ENST00000472725 MAPKAPK3Q16644 382 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 SPDYE7PQ495Y7 208 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 CT45A2Q5DJT8 189 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 FUNDC1Q8IVP5 155 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 CLECL1Q8IZS7 167 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 MDS2Q8NDY4 140 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 SPDL1Q96EA4 605 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 GIMAP5Q96F15 307 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 ITCHQ96J02 903 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 MAGED4Q96JG8 741 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 PANX1Q96RD7 426 aa18.46■□□□□ 0.55
SF1-213ENST00000472725 ELAC2Q9BQ52 826 aaKnown RBP18.46■□□□□ 0.55
SF1-213ENST00000472725 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.46■□□□□ 0.552e-9■■□□□ 11.8
SF1-213ENST00000472725 NXF5Q9H1B4 397 aaKnown RBP18.46■□□□□ 0.55
SF1-213ENST00000472725 EPN3Q9H201 632 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms