RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 CD274Q9NZQ7 290 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 HEY2Q9UBP5 337 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 ADGRE2Q9UHX3 823 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 MED12LQ86YW9 2145 aa8.45□□□□□ -1.06
VCL-204ENST00000472585 E7ESA3 106 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 OR10H2O60403 315 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 NME6O75414 186 aaPredicted RBP8.44□□□□□ -1.06
VCL-204ENST00000472585 ACTL6AO96019 429 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 FAM58BPP0C7Q3 252 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 CTAGE8P0CG41 777 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 CYP4B1P13584 511 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 MTHFD2P13995 350 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 GPX3P22352 226 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 CPOXP36551 454 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 MASP1P48740 699 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 LHX2P50458 406 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 NR1H2P55055 460 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 ATP5J2P56134 94 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 CLDN18P56856 261 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 POU4F1Q01851 419 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 DUSP2Q05923 314 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 PDIA2Q13087 525 aaKnown RBP8.44□□□□□ -1.06
VCL-204ENST00000472585 MORF4L2Q15014 288 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 TOMM20Q15388 145 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 ZKSCAN8Q15776 578 aaPredicted RBP8.44□□□□□ -1.06
VCL-204ENST00000472585 PAGE2BQ5JRK9 111 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 VWA1Q6PCB0 445 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 FAM111BQ6SJ93 734 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 ANGPTL8Q6UXH0 198 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 LRRC8AQ8IWT6 810 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 CTAGE4Q8IX94 777 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 MAPK1IP1LQ8NDC0 245 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 OR1J4Q8NGS1 313 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 GRK7Q8WTQ7 553 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 EXT2Q93063 718 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 LRRC39Q96DD0 335 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 ART5Q96L15 291 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 ATOH8Q96SQ7 321 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 MED18Q9BUE0 208 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 OR10A5Q9H207 317 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 ALG9Q9H6U8 611 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 CNOT10Q9H9A5 744 aaKnown RBP8.44□□□□□ -1.06
VCL-204ENST00000472585 SNX15Q9NRS6 342 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.44□□□□□ -1.06
VCL-204ENST00000472585 MS4A12Q9NXJ0 267 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 SPACA6W5XKT8 324 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 CR1P17927 2039 aa8.44□□□□□ -1.06
VCL-204ENST00000472585 RAI1Q7Z5J4 1906 aaPredicted RBP8.43□□□□□ -1.06
VCL-204ENST00000472585 A0A1W2PNV4 684 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 H0YC42 278 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 UBXN8O00124 270 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 PLOD2O00469 737 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 ZIC3O60481 467 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 UGT2B11O75310 529 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 PPM1BO75688 479 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 SEC31AO94979 1220 aaKnown RBP8.43□□□□□ -1.06
VCL-204ENST00000472585 CGAP01215 116 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 SSTR1P30872 391 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 MC3RP41968 323 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 PIK3CBP42338 1070 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 KIR2DL2P43627 348 aaPredicted RBP8.43□□□□□ -1.06
VCL-204ENST00000472585 PIK3CGP48736 1102 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 TPD52P55327 224 aaPredicted RBP8.43□□□□□ -1.06
VCL-204ENST00000472585 B3GALT5-AS1P59052 145 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 VEZF1Q14119 521 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 SETDB1Q15047 1291 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 NNATQ16517 81 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 GRHL2Q6ISB3 625 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 TMEM81Q6P7N7 255 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 LRRC70Q7Z2Q7 622 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 ZNF550Q7Z398 422 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 BTLAQ7Z6A9 289 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 SLC35F6Q8N357 371 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 ZFP3Q96NJ6 502 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 GPR22Q99680 433 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 TM9SF2Q99805 663 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 OR2B2Q9GZK3 357 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 ACBD3Q9H3P7 528 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 PIGMQ9H3S5 423 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 PRM3Q9NNZ6 103 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 EHD3Q9NZN3 535 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 ZNF639Q9UID6 485 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 PHF11Q9UIL8 331 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 FBXL2Q9UKC9 423 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 PACSIN3Q9UKS6 424 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 CES1P1Q9UKY3 287 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 MAPRE3Q9UPY8 281 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 EXO1Q9UQ84 846 aaKnown RBP8.43□□□□□ -1.06
VCL-204ENST00000472585 RNF11Q9Y3C5 154 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 TSC22D4Q9Y3Q8 395 aa8.43□□□□□ -1.06
VCL-204ENST00000472585 A0A087X1B8 175 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 A8MV72 311 aaPredicted RBP8.42□□□□□ -1.06
VCL-204ENST00000472585 K7EPI3 171 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 HCRTR2O43614 444 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 DYRK3O43781 588 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 CD5LO43866 347 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 PLAUP00749 431 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 THBDP07204 575 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 FAM157CP0CG43 387 aa8.42□□□□□ -1.06
VCL-204ENST00000472585 NR2F6P10588 404 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms