RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 ZNF610Q8N9Z0 462 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 OR7G3Q8NG95 312 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 SFXN2Q96NB2 322 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 KLHL4Q9C0H6 718 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 NXF5Q9H1B4 397 aaKnown RBP17.16■□□□□ 0.34
SORT1-203ENST00000471996 KLRF1Q9NZS2 232 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 LAMP3Q9UQV4 416 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 DTX4Q9Y2E6 619 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 ASB4Q9Y574 426 aa17.16■□□□□ 0.34
SORT1-203ENST00000471996 FAM95CA0A1B0GW59 222 aa17.15■□□□□ 0.34
SORT1-203ENST00000471996 A0A1W2PR48 441 aa17.15■□□□□ 0.34
SORT1-203ENST00000471996 PLPP1O14494 284 aa17.15■□□□□ 0.34
SORT1-203ENST00000471996 NR2F6P10588 404 aa17.15■□□□□ 0.34
SORT1-203ENST00000471996 GPX3P22352 226 aa17.15■□□□□ 0.34
SORT1-203ENST00000471996 SRD5A2P31213 254 aa17.15■□□□□ 0.34
SORT1-203ENST00000471996 RAP1GDS1P52306 607 aa17.15■□□□□ 0.34
SORT1-203ENST00000471996 SIRPAP78324 504 aa17.15■□□□□ 0.34
SORT1-203ENST00000471996 BCL2A1Q16548 175 aa17.15■□□□□ 0.34
SORT1-203ENST00000471996 MRM1Q6IN84 353 aaKnown RBP17.15■□□□□ 0.34
SORT1-203ENST00000471996 ZC3HC1Q86WB0 502 aaKnown RBP17.15■□□□□ 0.34
SORT1-203ENST00000471996 TRMT61AQ96FX7 289 aaKnown RBP17.15■□□□□ 0.34
SORT1-203ENST00000471996 CENPKQ9BS16 269 aa17.15■□□□□ 0.34
SORT1-203ENST00000471996 TMEM204Q9BSN7 226 aa17.15■□□□□ 0.34
SORT1-203ENST00000471996 DERL2Q9GZP9 239 aa17.15■□□□□ 0.34
SORT1-203ENST00000471996 LYARQ9NX58 379 aaKnown RBP17.15■□□□□ 0.34
SORT1-203ENST00000471996 A0A1W2PS29 197 aa17.14■□□□□ 0.33
SORT1-203ENST00000471996 OVOL3O00110 214 aa17.14■□□□□ 0.33
SORT1-203ENST00000471996 PPP3CBP16298 524 aa17.14■□□□□ 0.33
SORT1-203ENST00000471996 CCDC137Q6PK04 289 aaKnown RBP17.14■□□□□ 0.33
SORT1-203ENST00000471996 GPSM1Q86YR5 675 aa17.14■□□□□ 0.33
SORT1-203ENST00000471996 PLCZ1Q86YW0 608 aa17.14■□□□□ 0.33
SORT1-203ENST00000471996 RNF175Q8N4F7 328 aa17.14■□□□□ 0.33
SORT1-203ENST00000471996 OR7G1Q8NGA0 311 aa17.14■□□□□ 0.33
SORT1-203ENST00000471996 FIG4Q92562 907 aa17.14■□□□□ 0.33
SORT1-203ENST00000471996 REPS1Q96D71 796 aa17.14■□□□□ 0.33
SORT1-203ENST00000471996 WDR41Q9HAD4 459 aa17.14■□□□□ 0.33
SORT1-203ENST00000471996 MRPS18CQ9Y3D5 142 aaKnown RBP17.14■□□□□ 0.33
SORT1-203ENST00000471996 PSAT1Q9Y617 370 aa17.14■□□□□ 0.33
SORT1-203ENST00000471996 HEATR5AQ86XA9 2040 aa17.14■□□□□ 0.33
SORT1-203ENST00000471996 PRAMEF25A6NGN4 478 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 TMPRSS11DO60235 418 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 CCNT2O60583 730 aaKnown RBP17.13■□□□□ 0.33
SORT1-203ENST00000471996 AIFM1O95831 613 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 CNTFP26441 200 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 ARFIP1P53367 373 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 OCRLQ01968 901 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 FGFBP1Q14512 234 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 NNATQ16517 81 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 HUS1BQ8NHY5 278 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 AKAP1Q92667 903 aaKnown RBP eCLIP17.13■□□□□ 0.33
SORT1-203ENST00000471996 OMA1Q96E52 524 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 PLPPR2Q96GM1 343 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 ZNF717Q9BY31 904 aaPredicted RBP17.13■□□□□ 0.33
SORT1-203ENST00000471996 FBXL2Q9UKC9 423 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 CDC42EP3Q9UKI2 254 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 PROCRQ9UNN8 238 aa17.13■□□□□ 0.33
SORT1-203ENST00000471996 A0A0A6YYD5 115 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 UGT2B11O75310 529 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 EEDO75530 441 aaKnown RBP17.12■□□□□ 0.33
SORT1-203ENST00000471996 FAM58BPP0C7Q3 252 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 S1PR1P21453 382 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 ACVR1BP36896 505 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 DDX39BQ13838 428 aaKnown RBP17.12■□□□□ 0.33
SORT1-203ENST00000471996 OR52E8Q6IFG1 317 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 DNM1P46Q6ZS02 220 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 LRRC70Q7Z2Q7 622 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 SPATA6LQ8N4H0 392 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 PDPRQ8NCN5 879 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 DTNBP1Q96EV8 351 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 CFAP36Q96G28 342 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 C19orf24Q9BVV8 132 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 CD244Q9BZW8 370 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 AMBRA1Q9C0C7 1298 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 SLCO5A1Q9H2Y9 848 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 RNF122Q9H9V4 155 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 POPDC3Q9HBV1 291 aa17.12■□□□□ 0.33
SORT1-203ENST00000471996 PGRMC2O15173 223 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 WIPF1O43516 503 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 ZIC3O60481 467 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 ABCB7O75027 752 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 WISP3O95389 354 aaPredicted RBP17.11■□□□□ 0.33
SORT1-203ENST00000471996 PEPDP12955 493 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 PIK3R1P27986 724 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 BSGP35613 385 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 PIK3CBP42338 1070 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 HMGCS1Q01581 520 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 PLCXD2Q0VAA5 305 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 CYP1B1Q16678 543 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 CYP20A1Q6UW02 462 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 UBQLNLQ8IYU4 475 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 LCORQ96JN0 433 aaPredicted RBP17.11■□□□□ 0.33
SORT1-203ENST00000471996 DDX31Q9H8H2 851 aaKnown RBP17.11■□□□□ 0.33
SORT1-203ENST00000471996 EHD3Q9NZN3 535 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 CD274Q9NZQ7 290 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 DKKL1Q9UK85 242 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 CFL2Q9Y281 166 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 CR1P17927 2039 aa17.11■□□□□ 0.33
SORT1-203ENST00000471996 ACOX3O15254 700 aa17.1■□□□□ 0.33
SORT1-203ENST00000471996 TNFRSF21O75509 655 aa17.1■□□□□ 0.33
SORT1-203ENST00000471996 EPB42P16452 691 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms