RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 OR2L5Q8NG80 312 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 OR14C36Q8NHC7 312 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 LCN9Q8WX39 176 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 PIK3R3Q92569 461 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 RAB8BQ92930 207 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 GAL3ST3Q96A11 431 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 ELSPBP1Q96BH3 223 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 TMEM80Q96HE8 168 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 AMDHD1Q96NU7 426 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 TREX2Q9BQ50 279 aaPredicted RBP7.54□□□□□ -1.2
SMC4-212ENST00000470240 TRMT61BQ9BVS5 477 aaKnown RBP7.54□□□□□ -1.2
SMC4-212ENST00000470240 LGR4Q9BXB1 951 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 ZNF717Q9BY31 904 aaPredicted RBP7.54□□□□□ -1.2
SMC4-212ENST00000470240 SLC17A9Q9BYT1 436 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 PBX4Q9BYU1 374 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 ZBTB20Q9HC78 741 aaPredicted RBP7.54□□□□□ -1.2
SMC4-212ENST00000470240 BCL2L10Q9HD36 194 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 SIRT3Q9NTG7 399 aaPredicted RBP7.54□□□□□ -1.2
SMC4-212ENST00000470240 RLIMQ9NVW2 624 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 FBXL12Q9NXK8 326 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 ZNF226Q9NYT6 803 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 OR6C2Q9NZP2 312 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 AASSQ9UDR5 926 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 FTSJ1Q9UET6 329 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 PHF11Q9UIL8 331 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 MKLN1Q9UL63 735 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 KCNK6Q9Y257 313 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 SLC17A4Q9Y2C5 497 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 OR1A2Q9Y585 309 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 SPACA6W5XKT8 324 aa7.54□□□□□ -1.2
SMC4-212ENST00000470240 TBC1D3DA0A087WVF3 549 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TBC1D3IA0A087WXS9 549 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TBC1D3EA0A087X179 549 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TBC1D3KA0A087X1G2 549 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TRBV4-1A0A0J9YWV2 114 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 A0A1W2PQU0 124 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TBC1D3FA6NER0 549 aaPredicted RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 METTL15A6NJ78 407 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TBC1D3LB9A6J9 549 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 PLRG1O43660 514 aaKnown RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 KLHL18O94889 574 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 RAB36O95755 333 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 PAK4O96013 591 aaPredicted RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 SLC35G6P0C7Q6 338 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TBC1D3HP0C7X1 549 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 NR2F6P10588 404 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 ATP5A1P25705 553 aaKnown RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 PSMA1P25786 263 aaKnown RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 C21orf33P30042 268 aaPredicted RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 NTSR1P30989 418 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 GDI1P31150 447 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 LIPAP38571 399 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 BCL6P41182 706 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 WASP42768 502 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 KIAA1024LP59773 190 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 PRKCDQ05655 676 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 FOXD4Q12950 439 aaPredicted RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 ENPP2Q13822 863 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 IRF3Q14653 427 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TRAM2Q15035 370 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 OXA1LQ15070 435 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 NCF4Q15080 339 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 ZIC1Q15915 447 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 DUSP7Q16829 419 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 EIPR1Q53HC9 387 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TMEM201Q5SNT2 666 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 ATAT1Q5SQI0 421 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TPRG1LQ5T0D9 272 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 C12orf73Q69YU5 71 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TBC1D3GQ6DHY5 549 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TANGO2Q6ICL3 276 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TBC1D3CQ6IPX1 549 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 DUS1LQ6P1R4 473 aaKnown RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 CD300LDQ6UXZ3 194 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 SLC36A4Q6YBV0 504 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 Q6ZPB1 254 aaPredicted RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 PLEKHG7Q6ZR37 379 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TSEN54Q7Z6J9 526 aaKnown RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 CCDC103Q8IW40 242 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 TBC1D3Q8IZP1 549 aaPredicted RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 MMP21Q8N119 569 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 SLC34A3Q8N130 599 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 ZNF655Q8N720 491 aaPredicted RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 ACOT4Q8N9L9 421 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 FLCNQ8NFG4 579 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 ST13P5Q8NFI4 369 aaPredicted RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 OR2L3Q8NG85 312 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 OR52E1Q8NGJ3 308 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 OR2A1Q8NGT9 310 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 PIGXQ8TBF5 258 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 GNPDA2Q8TDQ7 276 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 ASB12Q8WXK4 309 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 FAM210AQ96ND0 272 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 MGLLQ99685 303 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 CHCHD6Q9BRQ6 235 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 RHNO1Q9BSD3 238 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 APOOQ9BUR5 198 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 SLIRPQ9GZT3 109 aaKnown RBP7.53□□□□□ -1.2
SMC4-212ENST00000470240 BTBD1Q9H0C5 482 aa7.53□□□□□ -1.2
SMC4-212ENST00000470240 GLIPR2Q9H4G4 154 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms