RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TCHHL1Q5QJ38 904 aaPredicted RBP12.12□□□□□ -0.47
CPSF4-210ENST00000469897 DCST1Q5T197 706 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 NSUN5P2Q63ZY6 315 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 TAOK1Q7L7X3 1001 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 CDYL2Q8N8U2 506 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 OR52R1Q8NGF1 315 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 ZNF592Q92610 1267 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 KLHL29Q96CT2 875 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 OMA1Q96E52 524 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 HSPBAP1Q96EW2 488 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 CNRIP1Q96F85 164 aaPredicted RBP12.12□□□□□ -0.47
CPSF4-210ENST00000469897 ZNF681Q96N22 645 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 FMO2Q99518 471 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 SH3GL2Q99962 352 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 C1QTNF3Q9BXJ4 246 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 ANKRA2Q9H9E1 313 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 BRF2Q9HAW0 419 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 GALNT9Q9HCQ5 603 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 RASSF1Q9NS23 344 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 TMEM216Q9P0N5 145 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 HEY2Q9UBP5 337 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 VPS29Q9UBQ0 182 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 ZNF180Q9UJW8 692 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 CFL2Q9Y281 166 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 PLLPQ9Y342 182 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 ZNF780BQ9Y6R6 833 aa12.12□□□□□ -0.47
CPSF4-210ENST00000469897 FAM221AA4D161 298 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 CD8B2A6NJW9 211 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 MANBAO00462 879 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 UGT2B11O75310 529 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 NME6O75414 186 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-210ENST00000469897 CBR3O75828 277 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 SUPT7LO94864 414 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 ESRRBO95718 433 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 PCSK2P16519 638 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 CNTFP26441 200 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 ECHS1P30084 290 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 PPICP45877 212 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 EMDP50402 254 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 ASCL1P50553 236 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 MRPS35P82673 323 aaKnown RBP12.11□□□□□ -0.47
CPSF4-210ENST00000469897 PLCXD2Q0VAA5 305 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 LGSNQ5TDP6 509 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 SLC30A6Q6NXT4 461 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 FAM83FQ8NEG4 500 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-210ENST00000469897 RDH11Q8TC12 318 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 CTHRC1Q96CG8 243 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 LRRC46Q96FV0 321 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 C16orf45Q96MC5 204 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-210ENST00000469897 FAIM2Q9BWQ8 316 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 CLEC4MQ9H2X3 399 aaPredicted RBP12.11□□□□□ -0.47
CPSF4-210ENST00000469897 SERHLQ9NQF3 203 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 PFDN4Q9NQP4 134 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 FETUBQ9UGM5 382 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 TRPS1Q9UHF7 1281 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 UTS2RQ9UKP6 389 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 MAPRE3Q9UPY8 281 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 GTF3C1Q12789 2109 aa12.11□□□□□ -0.47
CPSF4-210ENST00000469897 A0A087WUV0 522 aaPredicted RBP12.1□□□□□ -0.47
CPSF4-210ENST00000469897 ACOX3O15254 700 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 DLX3O60479 287 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 DIAPH2O60879 1101 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 CDH16O75309 829 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 REM1O75628 298 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 ACTL6AO96019 429 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 TAC1P20366 129 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 CTSSP25774 331 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 PEX19P40855 299 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 SLCO1A2P46721 670 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 STARP49675 285 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 DCAF7P61962 342 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 TRA2BP62995 288 aaKnown RBP12.1□□□□□ -0.47
CPSF4-210ENST00000469897 SRYQ05066 204 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 ZNF678Q5SXM1 525 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 PLXDC2Q6UX71 529 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 CDC20BQ86Y33 519 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 WDSUB1Q8N9V3 476 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 OR14L1PQ8NHC6 308 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 GOT1L1Q8NHS2 421 aaPredicted RBP12.1□□□□□ -0.47
CPSF4-210ENST00000469897 LINC01560Q8TB33 94 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 METTL6Q8TCB7 284 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 FAM222BQ8WU58 562 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 KAT2AQ92830 837 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 TMBIM1Q969X1 311 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 CALHM2Q9HA72 323 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 KLRF1Q9NZS2 232 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 PRODH2Q9UF12 536 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 CBLCQ9ULV8 474 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 EXO1Q9UQ84 846 aaKnown RBP12.1□□□□□ -0.47
CPSF4-210ENST00000469897 DLGAP4Q9Y2H0 992 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 GPR55Q9Y2T6 319 aaPredicted RBP12.1□□□□□ -0.47
CPSF4-210ENST00000469897 HIVEP1P15822 2718 aa12.1□□□□□ -0.47
CPSF4-210ENST00000469897 MBD3L4A6NDZ8 208 aaPredicted RBP12.09□□□□□ -0.47
CPSF4-210ENST00000469897 MBD3L3A6NE82 208 aaPredicted RBP12.09□□□□□ -0.47
CPSF4-210ENST00000469897 MBD3L5A6NJ08 208 aaPredicted RBP12.09□□□□□ -0.47
CPSF4-210ENST00000469897 A6NNC1 897 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 SNPHO15079 494 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 ULK1O75385 1050 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 KRT6AP02538 564 aa12.09□□□□□ -0.47
CPSF4-210ENST00000469897 KRT6BP04259 564 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms