RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 YIPF4Q9BSR8 244 aa16.31■□□□□ 0.2
RPL39-202ENST00000468844 RAD21L1Q9H4I0 556 aa16.31■□□□□ 0.2
RPL39-202ENST00000468844 EGFL7Q9UHF1 273 aa16.31■□□□□ 0.2
RPL39-202ENST00000468844 KLK13Q9UKR3 277 aa16.31■□□□□ 0.2
RPL39-202ENST00000468844 POMPQ9Y244 141 aa16.31■□□□□ 0.2
RPL39-202ENST00000468844 PADI2Q9Y2J8 665 aa16.31■□□□□ 0.2
RPL39-202ENST00000468844 AP3M1Q9Y2T2 418 aa16.31■□□□□ 0.2
RPL39-202ENST00000468844 LOC101059948A0A1B0GTJ6 334 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 HMGN4O00479 90 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 BRINP1O60477 761 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 DDAH2O95865 285 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 IGKV3-11P04433 115 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 CD63P08962 238 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 MATN1P21941 496 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 FOLR3P41439 243 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 MS4A2Q01362 244 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 FOXC1Q12948 553 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 TRIM25Q14258 630 aaKnown RBP16.3■□□□□ 0.2
RPL39-202ENST00000468844 FXNQ16595 210 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 MFSD12Q6NUT3 480 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 WDR53Q7Z5U6 358 aaPredicted RBP16.3■□□□□ 0.2
RPL39-202ENST00000468844 PTOV1Q86YD1 416 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 FAM13CQ8NE31 585 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 OR14A16Q8NHC5 309 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 SLC2A12Q8TD20 617 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 DAZLQ92904 295 aaKnown RBP16.3■□□□□ 0.2
RPL39-202ENST00000468844 NKD1Q969G9 470 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 MAL2Q969L2 176 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 ASB9Q96DX5 294 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 OTUB1Q96FW1 271 aaPredicted RBP16.3■□□□□ 0.2
RPL39-202ENST00000468844 SENP5Q96HI0 755 aaPredicted RBP16.3■□□□□ 0.2
RPL39-202ENST00000468844 WDR77Q9BQA1 342 aaPredicted RBP16.3■□□□□ 0.2
RPL39-202ENST00000468844 SUCOQ9UBS9 1254 aaKnown RBP16.3■□□□□ 0.2
RPL39-202ENST00000468844 CHD8Q9HCK8 2581 aa16.3■□□□□ 0.2
RPL39-202ENST00000468844 FAM220BPB1ANY3 271 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 BMP2P12643 396 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 DLSTP36957 453 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 MAN2A2P49641 1150 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 EMDP50402 254 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 DNASE1L3Q13609 305 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 NET1Q7Z628 596 aaPredicted RBP16.29■□□□□ 0.2
RPL39-202ENST00000468844 PTRH1Q86Y79 214 aaKnown RBP16.29■□□□□ 0.2
RPL39-202ENST00000468844 ZNF615Q8N8J6 731 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 MIPOL1Q8TD10 442 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 ZNF721Q8TF20 911 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 RAB8BQ92930 207 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 REXO5Q96IC2 774 aaKnown RBP16.29■□□□□ 0.2
RPL39-202ENST00000468844 OR8D2Q9GZM6 311 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 OR10A5Q9H207 317 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 OR51I1Q9H343 314 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 BCAP29Q9UHQ4 241 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 FARSAQ9Y285 508 aaKnown RBP16.29■□□□□ 0.2
RPL39-202ENST00000468844 DTX4Q9Y2E6 619 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 ANKRD11Q6UB99 2663 aaPredicted RBP16.29■□□□□ 0.2
RPL39-202ENST00000468844 IGF2RP11717 2491 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 C21orf140B9A014 251 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 DYRK3O43781 588 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 HTR1EP28566 365 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 DSTNP60981 165 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 RPS15P62841 145 aaKnown RBP16.29■□□□□ 0.2
RPL39-202ENST00000468844 CPEB2Q7Z5Q1 589 aaKnown RBP16.29■□□□□ 0.2
RPL39-202ENST00000468844 ZZZ3Q8IYH5 903 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 SLC16A11Q8NCK7 471 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 C16orf52Q8NHV5 167 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 WDR60Q8WVS4 1066 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 JADE3Q92613 823 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 ACTRT3Q9BYD9 372 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 THSD1Q9NS62 852 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 C19orf25Q9UFG5 118 aaPredicted RBP16.29■□□□□ 0.2
RPL39-202ENST00000468844 HS3ST3B1Q9Y662 390 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 AK5Q9Y6K8 562 aa16.29■□□□□ 0.2
RPL39-202ENST00000468844 LOC102723996A0A087X1L8 192 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 ELOVL7A1L3X0 281 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 SAGE2PA6NJ88 616 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 PRAMEF2O60811 474 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 COQ9O75208 318 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 OR12D1P0DN82 309 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 GPR143P51810 404 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 SLC37A1P57057 533 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 EXOSC6Q5RKV6 272 aaKnown RBP16.28■□□□□ 0.2
RPL39-202ENST00000468844 PAPD4Q6PIY7 484 aaKnown RBP16.28■□□□□ 0.2
RPL39-202ENST00000468844 LGI4Q8N135 537 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 IL22RA1Q8N6P7 574 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 OR7D2Q96RA2 312 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 GPR87Q9BY21 358 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 FAF1Q9UNN5 650 aaPredicted RBP16.28■□□□□ 0.2
RPL39-202ENST00000468844 WASF3Q9UPY6 502 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 HEMK1Q9Y5R4 338 aaPredicted RBP16.28■□□□□ 0.2
RPL39-202ENST00000468844 EML6Q6ZMW3 1958 aa16.28■□□□□ 0.2
RPL39-202ENST00000468844 PRAMEF27A3QJZ7 478 aa16.27■□□□□ 0.2
RPL39-202ENST00000468844 TRABD2BA6NFA1 517 aa16.27■□□□□ 0.2
RPL39-202ENST00000468844 A8MUI8 341 aa16.27■□□□□ 0.2
RPL39-202ENST00000468844 ACOT8O14734 319 aa16.27■□□□□ 0.2
RPL39-202ENST00000468844 BCAS2O75934 225 aaPredicted RBP16.27■□□□□ 0.2
RPL39-202ENST00000468844 SPINK2P20155 84 aa16.27■□□□□ 0.2
RPL39-202ENST00000468844 MMP11P24347 488 aa16.27■□□□□ 0.2
RPL39-202ENST00000468844 MAP3K8P41279 467 aa16.27■□□□□ 0.2
RPL39-202ENST00000468844 KHKP50053 298 aa16.27■□□□□ 0.2
RPL39-202ENST00000468844 EEF1A2Q05639 463 aaKnown RBP16.27■□□□□ 0.2
RPL39-202ENST00000468844 BNIP2Q12982 314 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms