RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 SH3GLB1Q9Y371 365 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 AP4B1Q9Y6B7 739 aa17.74■□□□□ 0.43
SMC4-209ENST00000468653 A0A0G2JPF8 293 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 OR2W5A6NFC9 320 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 HNRNPCL2B2RXH8 293 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 HNRNPCL3B7ZW38 293 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 CHRM4P08173 479 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 HNRNPCL4P0DMR1 293 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 OR1E2P47887 323 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 FUT5Q11128 374 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 MAP4K2Q12851 820 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 DSG2Q14126 1118 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 DUSP7Q16829 419 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 C6orf52Q5T4I8 152 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 C1orf189Q5VU69 101 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 PRAMEF8Q5VWM4 474 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 PRAMEF7Q5VXH5 474 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 TBPL2Q6SJ96 375 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 DGAT2L6Q6ZPD8 337 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 RASSF5Q8WWW0 418 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 PROX1Q92786 737 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 OR1F2PQ96R84 312 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 SPATA5L1Q9BVQ7 753 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 OSBPL11Q9BXB4 747 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 CXorf21Q9HAI6 301 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 GPC6Q9Y625 555 aaPredicted RBP17.73■□□□□ 0.43
SMC4-209ENST00000468653 U3KQV3 271 aa17.73■□□□□ 0.43
SMC4-209ENST00000468653 LNP1A1A4G5 178 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 H6PDO95479 791 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 IFNA16P05015 189 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 ITGA2P17301 1181 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 DCTP40126 519 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 STT3AP46977 705 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 HPCAP84074 193 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 PPP1R8Q12972 351 aaKnown RBP17.72■□□□□ 0.43
SMC4-209ENST00000468653 SERTAD2Q14140 314 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 MFSD4BQ5TF39 518 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 ARHGAP40Q5TG30 622 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 LAIR1Q6GTX8 287 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 OLIG3Q7RTU3 272 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 RHBDD1Q8TEB9 315 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 CDS1Q92903 461 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 TRNT1Q96Q11 434 aaKnown RBP17.72■□□□□ 0.43
SMC4-209ENST00000468653 RARRES3Q9UL19 164 aa17.72■□□□□ 0.43
SMC4-209ENST00000468653 FLRT2O43155 660 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 COQ9O75208 318 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 ALOX5P09917 674 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 ACP2P11117 423 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 ETS2P15036 469 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 CD247P20963 164 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 ARHGDIAP52565 204 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 BIKQ13323 160 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 DUSP5Q16690 384 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 IQCCQ4KMZ1 466 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 ZCCHC12Q6PEW1 402 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 DBX2Q6ZNG2 339 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 HIPK1Q86Z02 1210 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 CDRT4Q8N9R6 151 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 OR52R1Q8NGF1 315 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 ATOH1Q92858 354 aaPredicted RBP17.71■□□□□ 0.43
SMC4-209ENST00000468653 PTCHD1Q96NR3 888 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 ZNF347Q96SE7 839 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 PELOQ9BRX2 385 aaKnown RBP17.71■□□□□ 0.43
SMC4-209ENST00000468653 BTBD2Q9BX70 525 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 REEP1Q9H902 201 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 NECTIN3Q9NQS3 549 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 LANCL2Q9NS86 450 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 VNN3Q9NY84 501 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 NDUFAF4Q9P032 175 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 MMACHCQ9Y4U1 282 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 MAGED1Q9Y5V3 778 aaPredicted RBP17.71■□□□□ 0.43
SMC4-209ENST00000468653 D6RAR5 112 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 NTN3O00634 580 aaPredicted RBP17.71■□□□□ 0.43
SMC4-209ENST00000468653 DENRO43583 198 aaKnown RBP17.71■□□□□ 0.43
SMC4-209ENST00000468653 FESP07332 822 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 DAG1Q14118 895 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 MINDY4Q4G0A6 757 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 HEPHL1Q6MZM0 1159 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 TMEM179BQ7Z7N9 219 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 SLITRK4Q8IW52 837 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 KMT2EQ8IZD2 1858 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 PIGUQ9H490 435 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 THSD1Q9NS62 852 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 FTSJ1Q9UET6 329 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 SAMHD1Q9Y3Z3 626 aaKnown RBP17.71■□□□□ 0.43
SMC4-209ENST00000468653 FAM32AQ9Y421 112 aaKnown RBP17.71■□□□□ 0.43
SMC4-209ENST00000468653 PCDHGB3Q9Y5G1 929 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 CLDN16Q9Y5I7 305 aa17.71■□□□□ 0.43
SMC4-209ENST00000468653 A0A0C4DFX4 3053 aa17.7■□□□□ 0.42
SMC4-209ENST00000468653 A8MVJ9 347 aa17.7■□□□□ 0.42
SMC4-209ENST00000468653 HYAL3O43820 417 aaPredicted RBP17.7■□□□□ 0.42
SMC4-209ENST00000468653 CBX7O95931 251 aa17.7■□□□□ 0.42
SMC4-209ENST00000468653 IFNW1P05000 195 aa17.7■□□□□ 0.42
SMC4-209ENST00000468653 TNNI3P19429 210 aa17.7■□□□□ 0.42
SMC4-209ENST00000468653 DNAJA1P31689 397 aaKnown RBP17.7■□□□□ 0.42
SMC4-209ENST00000468653 CSTF2P33240 577 aaKnown RBP eCLIP17.7■□□□□ 0.42
SMC4-209ENST00000468653 KCNJ5P48544 419 aa17.7■□□□□ 0.42
SMC4-209ENST00000468653 ALDH3A2P51648 485 aa17.7■□□□□ 0.42
SMC4-209ENST00000468653 KCNC4Q03721 635 aa17.7■□□□□ 0.42
SMC4-209ENST00000468653 ZNF155Q12901 538 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms