RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 ARHGAP11AQ6P4F7 1023 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 EXOC3L1Q86VI1 746 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 FAM9CQ8IZT9 166 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 CLYBLQ8N0X4 340 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 RPRMLQ8N4K4 120 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 ZNF808Q8N4W9 903 aaPredicted RBP10.6□□□□□ -0.71
CDHR3-205ENST00000468143 OR7G2Q8NG99 324 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDHR3-205ENST00000468143 ZNF675Q8TD23 568 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 TWIST2Q8WVJ9 160 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 OMA1Q96E52 524 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 NODALQ96S42 347 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 TRMOQ9BU70 441 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 EML4Q9HC35 981 aaKnown RBP10.6□□□□□ -0.71
CDHR3-205ENST00000468143 ZFP64Q9NPA5 681 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 MYNNQ9NPC7 610 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 PNPLA3Q9NST1 481 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 C1orf109Q9NX04 203 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 SENP1Q9P0U3 644 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 PRODH2Q9UF12 536 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 GIMAP2Q9UG22 337 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 BAIAP2L1Q9UHR4 511 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 BOKQ9UMX3 212 aaPredicted RBP10.6□□□□□ -0.71
CDHR3-205ENST00000468143 CFL2Q9Y281 166 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 USP9XQ93008 2570 aaPredicted RBP10.6□□□□□ -0.71
CDHR3-205ENST00000468143 LRRC3CA6NJW4 275 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 MYO1GB0I1T2 1018 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 E9PLN8 166 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 GNB5O14775 395 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 PIP5K1BO14986 540 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 PPM1BO75688 479 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 BPGMP07738 259 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 DRD5P21918 477 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 PRPH2P23942 346 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 PPICP45877 212 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 GSTM5P46439 218 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 TRPC1P48995 793 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 MAN2A2P49641 1150 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 SMSP52788 366 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 CORO7P57737 925 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 RPL38P63173 70 aaKnown RBP10.59□□□□□ -0.71
CDHR3-205ENST00000468143 PLCXD2Q0VAA5 305 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 CEBPEQ15744 281 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 EMC4Q5J8M3 183 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 CEP85LQ5SZL2 805 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 ZNF585AQ6P3V2 769 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 TMEM107Q6UX40 140 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 RPTNQ6XPR3 784 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 TRILQ7L0X0 811 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 NUDCD3Q8IVD9 361 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 SAMD14Q8IZD0 417 aaPredicted RBP10.59□□□□□ -0.71
CDHR3-205ENST00000468143 MARVELD2Q8N4S9 558 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 C17orf47Q8NEP4 570 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 CLHC1Q8NHS4 586 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 FAM76AQ8TAV0 307 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 PKNOX2Q96KN3 472 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 RILPQ96NA2 401 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 GNRHR2Q96P88 292 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 ZIM3Q96PE6 472 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 TSSK3Q96PN8 268 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 DMRTA2Q96SC8 542 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 VKORC1Q9BQB6 163 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 ANGPTL4Q9BY76 406 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 SLC6A15Q9H2J7 730 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 GLIPR2Q9H4G4 154 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 ZNF395Q9H8N7 513 aaPredicted RBP10.59□□□□□ -0.71
CDHR3-205ENST00000468143 ALKBH4Q9NXW9 302 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 ZDHHC2Q9UIJ5 367 aa10.59□□□□□ -0.71
CDHR3-205ENST00000468143 GPR55Q9Y2T6 319 aaPredicted RBP10.59□□□□□ -0.71
CDHR3-205ENST00000468143 NAV2Q8IVL1 2488 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 RP1L1Q8IWN7 2480 aaPredicted RBP10.58□□□□□ -0.72
CDHR3-205ENST00000468143 TRGV5A0A0B4J1U4 118 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 ANKRD33BA6NCL7 494 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 LSM1O15116 133 aaKnown RBP10.58□□□□□ -0.72
CDHR3-205ENST00000468143 PEX11AO75192 247 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 UGT2B11O75310 529 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 TRIM3O75382 744 aaPredicted RBP10.58□□□□□ -0.72
CDHR3-205ENST00000468143 ERN1O75460 977 aaKnown RBP10.58□□□□□ -0.72
CDHR3-205ENST00000468143 SKAP2O75563 359 aaPredicted RBP10.58□□□□□ -0.72
CDHR3-205ENST00000468143 LYPLA1O75608 230 aaPredicted RBP10.58□□□□□ -0.72
CDHR3-205ENST00000468143 REM1O75628 298 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 TRAPPC6AO75865 159 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 BCAS2O75934 225 aaPredicted RBP10.58□□□□□ -0.72
CDHR3-205ENST00000468143 IGHG3P01860 377 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 NAGAP17050 411 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 SDC1P18827 310 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 GDF1P27539 372 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 HTR1EP28566 365 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 MC3RP41968 323 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 ETV4P43268 484 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 MASP1P48740 699 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 TMED10P49755 219 aaKnown RBP10.58□□□□□ -0.72
CDHR3-205ENST00000468143 DCAF7P61962 342 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 TOMM20Q15388 145 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 CES4AQ5XG92 561 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 XKRXQ6PP77 449 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 NUP54Q7Z3B4 507 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 WDR53Q7Z5U6 358 aaPredicted RBP10.58□□□□□ -0.72
CDHR3-205ENST00000468143 OR4N2Q8NGD1 307 aa10.58□□□□□ -0.72
CDHR3-205ENST00000468143 PPP1R14CQ8TAE6 165 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms