RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ZFAND2BQ8WV99 257 aa9.17□□□□□ -0.94
HDAC3-203ENST00000467533 GCDHQ92947 438 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-203ENST00000467533 C3orf49Q96BT1 292 aa9.17□□□□□ -0.94
HDAC3-203ENST00000467533 S100PBPQ96BU1 408 aa9.17□□□□□ -0.94
HDAC3-203ENST00000467533 VPS39Q96JC1 886 aa9.17□□□□□ -0.94
HDAC3-203ENST00000467533 EGFL8Q99944 293 aa9.17□□□□□ -0.94
HDAC3-203ENST00000467533 GRIP2Q9C0E4 1043 aa9.17□□□□□ -0.94
HDAC3-203ENST00000467533 STMN4Q9H169 189 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-203ENST00000467533 OR10A4Q9H209 315 aa9.17□□□□□ -0.94
HDAC3-203ENST00000467533 OCEL1Q9H607 264 aa9.17□□□□□ -0.94
HDAC3-203ENST00000467533 CISD1Q9NZ45 108 aaKnown RBP9.17□□□□□ -0.94
HDAC3-203ENST00000467533 FBXL2Q9UKC9 423 aa9.17□□□□□ -0.94
HDAC3-203ENST00000467533 GPR52Q9Y2T5 361 aa9.17□□□□□ -0.94
HDAC3-203ENST00000467533 ZNF175Q9Y473 711 aa9.17□□□□□ -0.94
HDAC3-203ENST00000467533 SNX8Q9Y5X2 465 aa9.17□□□□□ -0.94
HDAC3-203ENST00000467533 EFCAB8A8MWE9 144 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 PRKRAO75569 313 aaKnown RBP9.16□□□□□ -0.94
HDAC3-203ENST00000467533 VENTXO95231 258 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 PLGP00747 810 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-203ENST00000467533 TGFAP01135 160 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 CSF3P09919 207 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 FCGR2AP12318 317 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 APEHP13798 732 aaKnown RBP9.16□□□□□ -0.94
HDAC3-203ENST00000467533 HIST1H1TP22492 207 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-203ENST00000467533 DEKP35659 375 aaKnown RBP9.16□□□□□ -0.94
HDAC3-203ENST00000467533 TERF1P54274 439 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 IL2P60568 153 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 TIAL1Q01085 375 aaKnown RBP eCLIP9.16□□□□□ -0.94
HDAC3-203ENST00000467533 TNFRSF17Q02223 184 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 BSPH1Q075Z2 132 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 SNTA1Q13424 505 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 PDAP1Q13442 181 aaKnown RBP9.16□□□□□ -0.94
HDAC3-203ENST00000467533 RAB35Q15286 201 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 GUSBP1Q15486 140 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 SLCO4C1Q6ZQN7 724 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 BEND4Q6ZU67 534 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 ATG4DQ86TL0 474 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-203ENST00000467533 STK32CQ86UX6 486 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 PLCZ1Q86YW0 608 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 SRFBP1Q8NEF9 429 aaKnown RBP9.16□□□□□ -0.94
HDAC3-203ENST00000467533 STEAP2Q8NFT2 490 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 CALML6Q8TD86 181 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 C1orf54Q8WWF1 131 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 ANKRD7Q92527 254 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 TANKQ92844 425 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 HGDQ93099 445 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 TBCDQ9BTW9 1192 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 TRIM2Q9C040 744 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 NT5DC2Q9H857 520 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 C20orf96Q9NUD7 363 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-203ENST00000467533 FBXO5Q9UKT4 447 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 CLEC4AQ9UMR7 237 aa9.16□□□□□ -0.94
HDAC3-203ENST00000467533 PACSIN2Q9UNF0 486 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-203ENST00000467533 PRR14LQ5THK1 2151 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 H0YC42 278 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 GOLGA6L19H0YKK7 550 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 CLGNO14967 610 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 SH3BGRLO75368 114 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 TNFRSF21O75509 655 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 PSMB1P20618 241 aaKnown RBP9.15□□□□□ -0.94
HDAC3-203ENST00000467533 TLX1P31314 330 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-203ENST00000467533 CDKN2DP55273 166 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 TPD52P55327 224 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-203ENST00000467533 C21orf58P58505 322 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 PLCXD2Q0VAA5 305 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 SLAMF1Q13291 335 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 AP5B1Q2VPB7 878 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 RBM20Q5T481 1227 aaKnown RBP9.15□□□□□ -0.94
HDAC3-203ENST00000467533 C6orf163Q5TEZ5 329 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 RAET1LQ5VY80 246 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 C18orf63Q68DL7 685 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 NUP54Q7Z3B4 507 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 UBE3DQ7Z6J8 389 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 LMNTD2Q8IXW0 634 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 SEMA6DQ8NFY4 1073 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 GFM2Q969S9 779 aaKnown RBP9.15□□□□□ -0.94
HDAC3-203ENST00000467533 ADIPOR1Q96A54 375 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 OMA1Q96E52 524 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 FRMD8P1Q9BZ68 369 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-203ENST00000467533 PRRG4Q9BZD6 226 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 PITHD1Q9GZP4 211 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-203ENST00000467533 NXF5Q9H1B4 397 aaKnown RBP9.15□□□□□ -0.94
HDAC3-203ENST00000467533 PLSCR4Q9NRQ2 329 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 MS4A12Q9NXJ0 267 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 EHD3Q9NZN3 535 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 WHRNQ9P202 907 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 PHF11Q9UIL8 331 aa9.15□□□□□ -0.94
HDAC3-203ENST00000467533 TMEM89A2RUT3 159 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 FAM157AC9JC47 383 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 H3BML4 177 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 SAP18O00422 153 aaKnown RBP9.14□□□□□ -0.95
HDAC3-203ENST00000467533 RAMP1O60894 148 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 AQP8O94778 261 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 SCELO95171 688 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 GPR75O95800 540 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 NAGAP17050 411 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 IL32P24001 234 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 BUD31P41223 144 aaPredicted RBP9.14□□□□□ -0.95
HDAC3-203ENST00000467533 GDF5P43026 501 aa9.14□□□□□ -0.95
HDAC3-203ENST00000467533 CLDN15P56746 228 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms