RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 ANKRD55Q3KP44 614 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 KIAA1644Q3SXP7 199 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 CBWD6Q4V339 395 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 HIKESHIQ53FT3 197 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 KLHL26Q53HC5 615 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 CBWD3Q5JTY5 395 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 FFAR4Q5NUL3 377 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 C6orf163Q5TEZ5 329 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 AGBL2Q5U5Z8 902 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 LCN1P1Q5VSP4 162 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 LRRC66Q68CR7 880 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 NCR3LG1Q68D85 454 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 MACC1Q6ZN28 852 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 PAQR9Q6ZVX9 377 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 CENPVQ7Z7K6 275 aaPredicted RBP3.21□□□□□ -1.9
CCDC58-203ENST00000466854 PLD3Q8IV08 490 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 FAM219AQ8IW50 185 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 FAM114A1Q8IWE2 563 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 SYCE1Q8N0S2 351 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 RNF148Q8N7C7 305 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 ANKFN1Q8N957 763 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 MCUQ8NE86 351 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 OR56B1Q8NGI3 324 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 C9orf43Q8TAL5 461 aaPredicted RBP3.21□□□□□ -1.9
CCDC58-203ENST00000466854 HCAR2Q8TDS4 363 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 PAQR8Q8TEZ7 354 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 TSEN15Q8WW01 171 aaKnown RBP3.21□□□□□ -1.9
CCDC58-203ENST00000466854 KIFAP3Q92845 792 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 LGALS12Q96DT0 336 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 ERLEC1Q96DZ1 483 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 SENP5Q96HI0 755 aaPredicted RBP3.21□□□□□ -1.9
CCDC58-203ENST00000466854 MYADMQ96S97 322 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 ZNF607Q96SK3 696 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 CDRT15Q96T59 188 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 CYTH2Q99418 400 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 LITAFQ99732 161 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 GPA33Q99795 319 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 BPIFA3Q9BQP9 254 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 KATNB1Q9BVA0 655 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 FNDC11Q9BVV2 318 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 RBM4Q9BWF3 364 aaKnown RBP3.21□□□□□ -1.9
CCDC58-203ENST00000466854 ZNF416Q9BWM5 594 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 SPZ1Q9BXG8 430 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 ANKZF1Q9H8Y5 726 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 MED20Q9H944 212 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 CNOT10Q9H9A5 744 aaKnown RBP3.21□□□□□ -1.9
CCDC58-203ENST00000466854 AKIRIN1Q9H9L7 192 aaPredicted RBP3.21□□□□□ -1.9
CCDC58-203ENST00000466854 MRM3Q9HC36 420 aaKnown RBP3.21□□□□□ -1.9
CCDC58-203ENST00000466854 MRPL47Q9HD33 250 aaKnown RBP3.21□□□□□ -1.9
CCDC58-203ENST00000466854 CNOT2Q9NZN8 540 aaKnown RBP3.21□□□□□ -1.9
CCDC58-203ENST00000466854 LARSQ9P2J5 1176 aaKnown RBP3.21□□□□□ -1.9
CCDC58-203ENST00000466854 CTSFQ9UBX1 484 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 CFL2Q9Y281 166 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 SLC9A8Q9Y2E8 581 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 MRPS28Q9Y2Q9 187 aaKnown RBP3.21□□□□□ -1.9
CCDC58-203ENST00000466854 CBY1Q9Y3M2 126 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 HBS1LQ9Y450 684 aaKnown RBP3.21□□□□□ -1.9
CCDC58-203ENST00000466854 A0A0C4DFX4 3053 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 SZT2Q5T011 3432 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 CASP8AP2Q9UKL3 1982 aa3.21□□□□□ -1.9
CCDC58-203ENST00000466854 C5P01031 1676 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 COL18A1P39060 1754 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 A0A1B0GUL7 405 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 A0A1W2PRB8 838 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 ARHGAP42A6NI28 874 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 OR2AG2A6NM03 316 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 H0YIG0 161 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 TRAPPC3O43617 180 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 SSX4O60224 188 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 SSX5O60225 188 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 ECE2O60344 883 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 CRTAPO75718 401 aaPredicted RBP3.2□□□□□ -1.9
CCDC58-203ENST00000466854 ZNF189O75820 626 aaPredicted RBP3.2□□□□□ -1.9
CCDC58-203ENST00000466854 TRUB2O95900 331 aaKnown RBP3.2□□□□□ -1.9
CCDC58-203ENST00000466854 NGFP01138 241 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 RLN1P04808 185 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 HMBSP08397 361 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 PLA2G4BP0C869 781 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 LIFP15018 202 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 UCP1P25874 307 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 GABRA5P31644 462 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 CEACAM8P31997 349 aaPredicted RBP3.2□□□□□ -1.9
CCDC58-203ENST00000466854 PPP1R2P41236 205 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 ARHGDIAP52565 204 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 HNRNPKP61978 463 aaKnown RBP eCLIP3.2□□□□□ -1.9
CCDC58-203ENST00000466854 TPM4P67936 248 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 BST1Q10588 318 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 IL18Q14116 193 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 PDK4Q16654 411 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 PCK2Q16822 640 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 CDO1Q16878 200 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 VWC2Q2TAL6 325 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 USH1GQ495M9 461 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 GTDC1Q4AE62 458 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 PDLIM3Q53GG5 364 aaPredicted RBP3.2□□□□□ -1.9
CCDC58-203ENST00000466854 ATF7IP2Q5U623 682 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 FAM53AQ6NSI3 398 aaPredicted RBP3.2□□□□□ -1.9
CCDC58-203ENST00000466854 PPP1R2P3Q6NXS1 205 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 TRIM65Q6PJ69 517 aa3.2□□□□□ -1.9
CCDC58-203ENST00000466854 TOM1L2Q6ZVM7 507 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms